Revisions of R-base
Detlef Steuer (dsteuer)
committed
(revision 81)
- CHANGES IN R 3.5.3: INSTALLATION on a UNIX-ALIKE: * Detection of flags for C++98/11/14/17 has been improved: in particular if CXX??STD is set, it is tried first with no additional flags. PACKAGE INSTALLATION: * New macro F_VISIBILITY as an alternative to F77_VISIBILITY. This will become the preferred form in R 3.6.0. BUG FIXES: * writeLines(readLines(fnam), fnam) now works as expected, thanks to Peter Meissner's PR#17528. * setClassUnion() no longer warns, but uses message() for now, when encountering "non local" subclasses of class members. * stopifnot(exprs = T) no longer fails.
buildservice-autocommit
accepted
request 670208
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Detlef Steuer (dsteuer)
(revision 80)
baserev update by copy to link target
Detlef Steuer (dsteuer)
accepted
request 667336
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Todd R (TheBlackCat)
(revision 79)
- Add architecture-independent package directory. Taken from the Fedora version of R. - Add RPM macros to ease installation of R packages. - Fix building on older versions of openSUSE.
buildservice-autocommit
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request 660243
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Detlef Steuer (dsteuer)
(revision 78)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 77)
- CHANGES IN R 3.5.2: PACKAGE INSTALLATION: * New macro CXX_VISIBILITY analogous to C_VISIBILITY (which several packages have been misusing for C++ code) for the default C++ compiler (but not necessarily one used for non-default C++ dialects like C++14). TESTING: * The random number generator tests in tests/p-r-random-tests.R no longer fail occasionally as they now randomly sample from "certified" random seeds. BUG FIXES: * The "glm" method of drop1() miscalculated the score test (test="Rao") when the model contained an offset. * Linear multiple empty models such as lm(y ~ 0) now have a correctly dimensioned empty coefficient matrix; reported by Brett Presnell. * vcov(<empty mlm>) and hence confint() now work (via a consistency change in summary.lm()). * confint(<multiple lm()>) now works correctly; reported on R-devel by Steven Pav. * quade.test() now also works correctly when its arguments are not yet sorted along groups, fixing PR#15842. * Installation on a Unix-alike tries harder to link to the pthread library where required (rather than relying on OpenMP to provide it: configuring with --disable-openmp was failing on some Linux systems). * The data.frame method for print(x) is fast now also for large data frames x and got an optional argument max, thanks to suggestions by Juan Telleria. * hist() no longer integer overflows in very rare cases, fixing
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request 620182
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Detlef Steuer (dsteuer)
(revision 76)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 75)
- CHANGES IN R 3.5.1 : BUG FIXES: * file("stdin") is no longer considered seekable. * dput() and dump() are no longer truncating when options(deparse.max.lines = *) is set. * Calls with an S3 class are no longer evaluated when printed, fixing part of PR#17398, thanks to a patch from Lionel Henry. * Allow file argument of Rscript to include space even when it is first on the command line. * callNextMethod() uses the generic from the environment of the calling method. Reported by Herv'e Pag`es with well documented examples. * Compressed file connections are marked as blocking. * optim(*, lower = c(-Inf, -Inf)) no longer warns (and switches the method), thanks to a suggestion by John Nash. * predict(fm, newdata) is now correct also for models where the formula has terms such as splines::ns(..) or stats::poly(..), fixing PR#17414, based on a patch from Duncan Murdoch. * simulate.lm(glm(*, gaussian(link = <non-default>))) has been corrected, fixing PR#17415 thanks to Alex Courtiol. * unlist(x) no longer fails in some cases of nested empty lists. Reported by Steven Nydick. * qr.coef(qr(<all 0, w/ colnames>)) now works. Reported by Kun Ren. * The radix sort is robust to vectors with >1 billion elements (but long vectors are still unsupported). Thanks to Matt Dowle for the fix. * Terminal connections (e.g., stdin) are no longer buffered. Fixes PR#17432. * deparse(x), dput(x) and dump() now respect c()'s argument names
buildservice-autocommit
accepted
request 600354
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Detlef Steuer (dsteuer)
(revision 74)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 73)
- CHANGES IN R 3.5.0: SIGNIFICANT USER-VISIBLE CHANGES: * All packages are by default byte-compiled on installation. This makes the installed packages larger (usually marginally so) and may affect the format of messages and tracebacks (which often exclude .Call and similar). NEW FEATURES: * factor() now uses order() to sort its levels, rather than sort.list(). This allows factor() to support custom vector-like objects if methods for the appropriate generics are defined. It has the side effect of making factor() succeed on empty or length-one non-atomic vector(-like) types (e.g., "list"), where it failed before. * diag() gets an optional names argument: this may require updates to packages defining S4 methods for it. * chooseCRANmirror() and chooseBioCmirror() no longer have a useHTTPS argument, not needed now all R builds support https:// downloads. * New summary() method for warnings() with a (somewhat experimental) print() method. * (methods package.) .self is now automatically registered as a global variable when registering a reference class method. * tempdir(check = TRUE) recreates the tempdir() directory if it is no longer valid (e.g. because some other process has cleaned up the /tmp directory). * New askYesNo() function and "askYesNo" option to ask the user binary response questions in a customizable but consistent way. (Suggestion of PR#17242.) * New low level utilities ...elt(n) and ...length() for working with ... parts inside a function.
Darin Perusich (deadpoint)
committed
(revision 72)
added gcc-c++ build dependency
buildservice-autocommit
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request 589689
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Detlef Steuer (dsteuer)
(revision 71)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 70)
- Setting correctly R_UNZIPCMD Corrects this bug: http://bugzilla.suse.com/show_bug.cgi?id=1083075
buildservice-autocommit
accepted
request 587453
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Detlef Steuer (dsteuer)
(revision 69)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 68)
- upstrem updated to 3.4.4 CHANGES IN R 3.4.4: NEW FEATURES: * Sys.timezone() tries more heuristics on Unix-alikes and so is more likely to succeed (especially on Linux). For the slowest method, a warning is given recommending that TZ is set to avoid the search. * The version of LAPACK included in the sources has been updated to 3.8.0 (for the routines used by R, a very minor bug-fix change). * parallel::detectCores(logical = FALSE) is ignored on Linux systems, since the information is not available with virtualized OSes. INSTALLATION on a UNIX-ALIKE: * configure will use pkg-config to find the flags to link to jpeg if available (as it should be for the recently-released jpeg-9c and libjpeg-turbo). (This amends the code added in R 3.3.0 as the module name in jpeg-9c is not what that tested for.) DEPRECATED AND DEFUNCT: * Sys.timezone(location = FALSE) (which was a stop-gap measure for Windows long ago) is deprecated. It no longer returns the value of environment variable TZ (usually a location). * Legacy support of make macros such as CXX1X is formally deprecated: use the CXX11 forms instead. BUG FIXES: * power.prop.test() now warns when it cannot solve the problem, typically because of impossible constraints. (PR#17345) * removeSource() no longer erroneously removes NULL in certain cases, thanks to D'enes T'oth. * nls(`NO [mol/l]` ~ f(t)) and nls(y ~ a) now work. (Partly from PR#17367)
buildservice-autocommit
accepted
request 586283
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Detlef Steuer (dsteuer)
(revision 67)
baserev update by copy to link target
Detlef Steuer (dsteuer)
accepted
request 586069
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Cristian Rodríguez (elvigia)
(revision 66)
- Do not buildrequire xorg-x11-devel but individual x libs.
buildservice-autocommit
accepted
request 546684
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Detlef Steuer (dsteuer)
(revision 65)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 64)
- upstream updated to 3.4.3 CHANGES IN R 3.4.3: INSTALLATION on a UNIX-ALIKE: * A workaround has been added for the changes in location of time-zone files in macOS 10.13 'High Sierra' and again in 10.13.1, so the default time zone is deduced correctly from the system setting when R is configured with --with-internal-tzcode (the default on macOS). * R CMD javareconf has been updated to recognize the use of a Java 9 SDK on macOS. BUG FIXES: * raw(0) & raw(0) and raw(0) | raw(0) again return raw(0) (rather than logical(0)). * intToUtf8() converts integers corresponding to surrogate code points to NA rather than invalid UTF-8, as well as values larger than the current Unicode maximum of 0x10FFFF. (This aligns with the current RFC3629.) * Fix calling of methods on S4 generics that dispatch on ... when the call contains .... * Following Unicode 'Corrigendum 9', the UTF-8 representations of U+FFFE and U+FFFF are now regarded as valid by utf8ToInt(). * range(c(TRUE, NA), finite = TRUE) and similar no longer return NA. (Reported by Lukas Stadler.) * The self starting function attr(SSlogis, "initial") now also works when the y values have exact minimum zero and is slightly changed in general, behaving symmetrically in the y range. * The printing of named raw vectors is now formatted nicely as for other such atomic vectors, thanks to Lukas Stadler.
buildservice-autocommit
accepted
request 529866
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Detlef Steuer (dsteuer)
(revision 63)
baserev update by copy to link target
Detlef Steuer (dsteuer)
committed
(revision 62)
- upstream update to 3.4.2 CHANGES IN R 3.4.2: NEW FEATURES: * Setting the LC_ALL category in Sys.setlocale() invalidates any cached locale-specific day/month names and the AM/PM indicator for strptime() (as setting LC_TIME has since R 3.1.0). * The version of LAPACK included in the sources has been updated to 3.7.1, a bug-fix release. * The default for tools::write_PACKAGES(rds_compress=) has been changed to "xz" to match the compression used by CRAN. * c() and unlist() are now more efficient in constructing the names(.) of their return value, thanks to a proposal by Suharto Anggono. (PR#17284) UTILITIES: * R CMD check checks for and R CMD build corrects CRLF line endings in shell scripts configure and cleanup (even on Windows). INSTALLATION on a UNIX-ALIKE: * The order of selection of OpenMP flags has been changed: Oracle Developer Studio 12.5 accepts -fopenmp and -xopenmp but only the latter enables OpenMP so it is now tried first. BUG FIXES: * within(List, rm(x1, x2)) works correctly again, including when List[["x2"]] is NULL. * regexec(pattern, text, *) now applies as.character(.) to its first two arguments, as documented. * write.table() and related functions, writeLines(), and perhaps other functions writing text to connections did not signal errors when the writes failed, e.g. due to a disk being full. Errors will now be signalled if detected during the write, warnings if detected when the connection is closed. (PR#17243)
Displaying revisions 61 - 80 of 141