Revisions of python-scikit-image
Dirk Mueller (dirkmueller)
accepted
request 1172004
from
Benjamin Greiner (bnavigator)
(revision 37)
- Update to 0.23.2 ## Bug Fixes * Make sure skimage.util.img_as_ubyte supports the edge case where dtype('uint64').type of the provided image is np.ulonglong instead of np.uint64 (#7392). ## Documentation * Add date to 0.23.1 release notes (#7384). * Fix docstring of connectivity parameter in skimage.segmentation.watershed (#7360). ## Infrastructure * Ignore Sphinx warning about unpickable cache (#7400). * Simplify instructions on changelist in PR template (#7401). ## Maintenance * Use numpy.inf instead of deprecated numpy.infty (#7386). * Update Ruff config (#7387). * Update matrix and names of Azure pipelines configuration (#7390). * Use upload- and download-artifact v4 (#7389). * Ignore arch specific cast warnings originating from astype in tests (#7393). * Update link to numpydoc example.py (#7395). - Release 0.23.1/0.23.0 ## Highlights * Ensure skimage.morphology.closing and skimage.morphology.opening are extensive and anti-extensive, respectively, if the footprint is not mirror symmetric (#6695). * Add parameter mode to binary_erosion, binary_dilation, binary_opening and binary_closing in skimage.morphology. These new parameters determine how array borders are handled (#6695). * Add parameters mode and cval to erosion, dilation, opening, closing, white_tophat, and black_tophat in skimage.morphology. These new parameters determine how array borders are handled (#6695). * Speedup skimage.util.map_array by parallelization with Cython's prange (#7266). ## New Features * Add new intensity_std property to skimage.measure.regionprops which computes the standard deviation of the intensity in a region (#6712). * Add parameter mode to binary_erosion, binary_dilation, binary_opening and binary_closing in skimage.morphology. These new parameters determine how array borders are handled (#6695). * Add functions mirror_footprint and pad_footprint to skimage.morphology (#6695). * Add parameters mode and cval to erosion, dilation, opening, closing, white_tophat, and black_tophat in skimage.morphology. These new parameters determine how array borders are handled (#6695). * Add new parameter spacing to segmentation.expand_labels to support anisotropic images (#7080). ## API Changes * Drop support for Python 3.9 (#7217). * Parameters shift_x and shift_y in skimage.morphology.erosion and skimage.morphology.dilation are deprecated. Use pad_footprint or modify the footprint manually instead (#6695). * Remove unexpected value scaling in skimage.morphology.skeletonize_3d for non-binary input images. skeletonize_3d now always returns a binary array like similar functions (#7095). * Deprecate function skimage.feature.plot_matches in favor of skimage.feature.plot_matched_features (#7255). * Deprecate skimage.morphology.skeletonize_3d in favor of just skimage.morphology.skeletonize (#7094). * Deprecate parameter output in skimage.filters.gaussian; use out instead (#7225). * Change the default value of the parameters shift_x, shift_y and shift_z from False to 0 in the skimage.filters.rank functions. This has not impact on the results. Warn in case boolean shifts are provided from now on (#7320). * Performance * Add lazy loading to skimage.metrics module (#7211). * Speedup skimage.util.map_array by parallelization with Cython's prange (#7266). ## Bug Fixes * Add exception to avoid surprising result when image is too small for the given parameters in skimage.feature.hog (#7153). * Ensure skimage.morphology.closing and skimage.morphology.opening are extensive and anti-extensive, respectively, if the footprint is not mirror symmetric (#6695). * Avoid a TypeError in skimage.registration.phase_cross_correlation when the real-time shift cannot be determined (disambiguate=True). Display a warning instead (#7259). * Fix logic in skimage.graph.pixel_graph which raised a TypeError when the parameter edge_function was provided without a mask (#7310). * Ensure cache stays empty when cache=False is passed to skimage.measure.regionprops (#7333).
buildservice-autocommit
accepted
request 1159081
from
Markéta Machová (mcalabkova)
(revision 36)
baserev update by copy to link target
Markéta Machová (mcalabkova)
accepted
request 1158635
from
Atri Bhattacharya (badshah400)
(revision 35)
- Update to version 0.22.0. - Drop upstreamed patches: np-warn.patch, skimage-numpy125.patch. - Enable no longer failing tests.
buildservice-autocommit
accepted
request 1105471
from
Markéta Machová (mcalabkova)
(revision 34)
baserev update by copy to link target
Markéta Machová (mcalabkova)
accepted
request 1105328
from
Markéta Machová (mcalabkova)
(revision 33)
- Add upstream patches np-warn.patch and skimage-numpy125.patch to fix build with NumPy 1.25
buildservice-autocommit
accepted
request 1097958
from
Markéta Machová (mcalabkova)
(revision 32)
baserev update by copy to link target
Markéta Machová (mcalabkova)
accepted
request 1097443
from
Atri Bhattacharya (badshah400)
(revision 31)
- Update to version 0.21.0 - Update minimum versions of Requires/BuildRequires in keeping with upstream. - Use pyproject_* macros to build and install since there is no setup.py any more. - Drop skimage-fix-module-install.patch: fixed upstream. - Fix some hashbangs before build. - New Requires: python-lazy-loader. - Set PYTEST_DEBUG_TEMPROOT to a tmp dir created within the working dir as tests now require it to be writable. - Some more tests disabled due to flaky floating point issues.
buildservice-autocommit
accepted
request 986472
from
Dirk Mueller (dirkmueller)
(revision 30)
baserev update by copy to link target
Dirk Mueller (dirkmueller)
accepted
request 986252
from
Benjamin Greiner (bnavigator)
(revision 29)
- Update to 0.19.3 * Revert unintentional change to default multichannel behavior introduced in v0.19.0 for skimage.restoration.cycle_spin (now defaults to single channel again) * Fix corner case with an optimal angle of 0 degrees in hough_line_peaks * Fixed the gallery example involving registration with log-polar transformations * Update test suite for compatibility with the most recent tifffile release. * warp/rotate: fixed a bug with clipping when cval is not in the input range * Fix computation of histogram bins for multichannel integer-valued images * Update skimage.future.manual_polygon_segmentation to work with Matplotlib 3.5. * Update skimage.io.imread to avoid warnings when using imageio>=2.16.2. * Now compatible with Pillow >= 9.1 (palette may contain <256 entries) * Added support for NumPy 1.23 - Release 0.19.2 * This is primarily a bug fix release, although there is one new gallery example related to detection of fluorescence at the nuclear envelope of mammalian cells. - Release 0.19.1 * This is a small bug fix release that resolves a couple of backwards compatibility issues. - Release 0.19.0 * A highlight of this release is the addition of the popular
buildservice-autocommit
accepted
request 866145
from
Matej Cepl (mcepl)
(revision 28)
baserev update by copy to link target
Matej Cepl (mcepl)
accepted
request 866134
from
Benjamin Greiner (bnavigator)
(revision 27)
- Update to 0.18.1
buildservice-autocommit
accepted
request 826034
from
Tomáš Chvátal (scarabeus_iv)
(revision 26)
baserev update by copy to link target
Tomáš Chvátal (scarabeus_iv)
accepted
request 826028
from
Benjamin Greiner (bnavigator)
(revision 25)
I guess the "no update because of python2 packages" restriction is no longer in place, is it? https://build.opensuse.org/request/show/693830#comments - Apply patches to fix errors due to numpy warnings * scikit-image-pr4731-floatingwarnings.patch gh#scikit-image/scikit-image#4731 * scikit-image-pr4735-ragged.patch gh#scikit-image/scikit-image#4735 - Update requirements - make multibuild
buildservice-autocommit
accepted
request 802914
from
Tomáš Chvátal (scarabeus_iv)
(revision 24)
baserev update by copy to link target
Tomáš Chvátal (scarabeus_iv)
committed
(revision 23)
- We need at least pytest 4.x series
buildservice-autocommit
accepted
request 765257
from
Tomáš Chvátal (scarabeus_iv)
(revision 22)
baserev update by copy to link target
Tomáš Chvátal (scarabeus_iv)
committed
(revision 21)
- Skip 2 failing tests on 32bit - Do not buildrequire nose
buildservice-autocommit
accepted
request 755837
from
Factory Maintainer (factory-maintainer)
(revision 20)
baserev update by copy to link target
Tomáš Chvátal (scarabeus_iv)
committed
(revision 19)
- Use xdist to speed up the testing that takes bit too much time
buildservice-autocommit
accepted
request 750915
from
Dirk Mueller (dirkmueller)
(revision 18)
baserev update by copy to link target
Displaying revisions 1 - 20 of 37