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Wordom is a (simple) command line utility conceived to spare the user
some time in manipulating and converting dcd, xtc, pdb, crd and xyz
files. Wordom is also a versatile program for a broad range of types
of analysis of molecular dynamics trajectories. Original tools in
Wordom include a module for the calculation of order parameters to
monitor polypeptide aggregation and a procedure to evaluate
significance of sampling for principal component analysis. As a plus,
it's easy to use in shell scripts. Due to its simplicity, it is very
easy and straightforward to add your own analysis module. Basically,
all you have to do is write the algorithm. The data are made available
by the existing wordom i/o modules.

   M. Seeber, M. Cecchini, F. Rao, G. Settanni and A. Caflisch;
   Wordom: a program for efficient analysis of molecular dynamics
   Bioinformatics, 2007, 23(19):2625-2627

Source Files

Filename Size Changed Actions
1_wordom.patch 1.43 KB Download File
2_gmx4.patch 496 Bytes Download File
wordom.changes 353 Bytes Download File
wordom.spec 2.13 KB Download File
wordom_0.21-rc6.tar.bz2 292 KB Download File

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