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GlimmerHMM v3.0.1 (GlimmerHMM is a system for finding genes in eukaryotic DNA)

GlimmerHMM is a new gene finder based on a Generalized Hidden Markov Model (GHMM). Although the gene finder conforms to the overall mathematical framework of a GHMM, additionally it incorporates splice site models adapted from the GeneSplicer program and a decision tree adapted from GlimmerM. It also utilizes Interpolated Markov Models for the coding and noncoding models . Currently, GlimmerHMM's GHMM structure includes introns of each phase, intergenic regions, and four types of exons (initial, internal, final, and single).

Source Files

Filename Size Changed Actions
GlimmerHMM-3.0.1.tar.gz 43.5 MB over 5 years ago
glimmerhmm.spec 2.74 KB over 5 years ago Download File

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