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TopHat v2.0.6 (Fast splice junction mapper for RNA-Seq reads)

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.

TopHat is a collaborative effort between the Institute of Genetic Medicine at Johns Hopkins University, the Departments of Mathematics and Molecular and Cell Biology at the University of California, Berkeley and the Department of Stem Cell and Regenerative Biology at Harvard University.  

Source Files

Filename Size Changed Actions
TopHat.spec 3.73 KB Download File
boost_1_44_0.zip 72.2 MB
samtools-0.1.18.tar.bz2 370 KB Download File
tophat-2.0.6.tar.gz 1.67 MB Download File

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