Overview
Request 1036304 accepted
- Update to version 2.4.1
* In genewise, a more flexible splice site model is allowed,
which takes PWMs of the 5' and 3' splice sites
* genewise has a new experimental model which can take into
account intron phase position, -alg 623P. This allows tieing
intron positions to specific points in the protein
* There is a new program, promoterwise, which is available for
aligning sequences that are not co-linear
* The dynamite compiler generated code for the divide and
conquor code is about twice as fast
- Spec file cleanup
- Set a default for config dir, add add_WISECONFIGDIR_default.patch
- Created by StefanBruens
- In state accepted
Request History
StefanBruens created request
- Update to version 2.4.1
* In genewise, a more flexible splice site model is allowed,
which takes PWMs of the 5' and 3' splice sites
* genewise has a new experimental model which can take into
account intron phase position, -alg 623P. This allows tieing
intron positions to specific points in the protein
* There is a new program, promoterwise, which is available for
aligning sequences that are not co-linear
* The dynamite compiler generated code for the divide and
conquor code is about twice as fast
- Spec file cleanup
- Set a default for config dir, add add_WISECONFIGDIR_default.patch
badshah400 accepted request
Thanks.