Advanced Comparison of Protein Sequence to Genomic DNA Sequence
Wise2 is a package focused on comparisons of bio polymers, commonly DNA
sequence and protein sequence.
- Sources inherited from project science
- Download package
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Checkout Package
osc -A https://api.opensuse.org checkout home:redwil:15.4/wise2 && cd $_ - Create Badge
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Source Files
| Filename | Size | Changed |
|---|---|---|
| add_WISECONFIGDIR_default.patch | 0000000391 391 Bytes | |
| wise2-hmmer2-sqio.patch | 0000007007 6.84 KB | |
| wise2-welcome.patch | 0000000449 449 Bytes | |
| wise2.4.1.tar.gz | 0003193910 3.05 MB | |
| wise2.changes | 0000001043 1.02 KB | |
| wise2.spec | 0000002396 2.34 KB |
Latest Revision
Atri Bhattacharya (badshah400)
accepted
request 1036304
from
Stefan Brüns (StefanBruens)
(revision 2)
- Update to version 2.4.1
* In genewise, a more flexible splice site model is allowed,
which takes PWMs of the 5' and 3' splice sites
* genewise has a new experimental model which can take into
account intron phase position, -alg 623P. This allows tieing
intron positions to specific points in the protein
* There is a new program, promoterwise, which is available for
aligning sequences that are not co-linear
* The dynamite compiler generated code for the divide and
conquor code is about twice as fast
- Spec file cleanup
- Set a default for config dir, add add_WISECONFIGDIR_default.patch
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