File R-ATQ.spec of Package R-ATQ
# Automatically generated by CRAN2OBS
#
# Spec file for package ATQ
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
#
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany.
#
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# remain the property of their copyright owners, unless otherwise agreed
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%global packname ATQ
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 0.2.3
Release: 0
Summary: Alert Time Quality - Evaluating Timely Epidemic Metrics
Group: Development/Libraries/Other
License: GPL (>= 3)
URL: http://cran.r-project.org/web/packages/%{packname}
Source: ATQ_0.2.3.tar.gz
Requires: R-base
Requires: R-dplyr
Requires: R-purrr
Requires: R-zoo
Requires: R-ggplot2
Requires: R-gridExtra
Requires: R-rlang
Requires: R-scales
Requires: R-cli
Requires: R-generics
Requires: R-glue
Requires: R-lifecycle
Requires: R-magrittr
Requires: R-pillar
Requires: R-R6
Requires: R-tibble
Requires: R-tidyselect
Requires: R-vctrs
Requires: R-gtable
Requires: R-isoband
Requires: R-withr
Requires: R-farver
Requires: R-labeling
Requires: R-RColorBrewer
Requires: R-viridisLite
Requires: R-utf8
Requires: R-pkgconfig
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-dplyr
BuildRequires: R-purrr
BuildRequires: R-zoo
BuildRequires: R-ggplot2
BuildRequires: R-gridExtra
BuildRequires: R-rlang
BuildRequires: R-scales
BuildRequires: R-cli
BuildRequires: R-generics
BuildRequires: R-glue
BuildRequires: R-lifecycle
BuildRequires: R-magrittr
BuildRequires: R-pillar
BuildRequires: R-R6
BuildRequires: R-tibble
BuildRequires: R-tidyselect
BuildRequires: R-vctrs
BuildRequires: R-gtable
BuildRequires: R-isoband
BuildRequires: R-withr
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
BuildRequires: R-utf8
BuildRequires: R-pkgconfig
Suggests: R-knitr
Suggests: R-rmarkdown
Suggests: R-cli
Suggests: R-fansi
Suggests: R-farver
Suggests: R-utf8
Suggests: R-devtools
Suggests: R-testthat
%description
Provides tools for evaluating timely epidemic detection models within
school absenteeism-based surveillance systems. Introduces the concept
of alert time quality as an evaluation metric. Includes functions to
simulate populations, epidemics, and alert metrics associated with
epidemic spread using population census data. The methods are based on
research published in Vanderkruk et al. (2023)
<doi:10.1186/s12889-023-15747-z> and Ward et al. (2019)
<doi:10.1186/s12889-019-7521-7>.
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog