File R-CMMs.spec of Package R-CMMs

# Automatically generated by CRAN2OBS
# 
# Spec file for package CMMs 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  CMMs 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.0 
Release:        0 
Summary:        Compositional Mediation Model 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         CMMs_1.0.0.tar.gz 
Requires:       R-base 
Requires:	R-fastDummies
Requires:	R-survey
Requires:	R-robCompositions
Requires:	R-ggplot2
Requires:	R-forcats
Requires:	R-dplyr
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-data.table
Requires:	R-stringr
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-scales
Requires:	R-withr
Requires:	R-pls
Requires:	R-cvTools
Requires:	R-e1071
Requires:	R-fda
Requires:	R-rrcov
Requires:	R-fpc
Requires:	R-GGally
Requires:	R-ggfortify
Requires:	R-kernlab
Requires:	R-mclust
Requires:	R-tidyr
Requires:	R-robustbase
Requires:	R-robustHD
Requires:	R-VIM
Requires:	R-zCompositions
Requires:	R-reshape2
Requires:	R-Rcpp
Requires:	R-RcppEigen
Requires:	R-minqa
Requires:	R-numDeriv
Requires:	R-mitools
Requires:	R-RcppArmadillo
Requires:	R-proxy
Requires:	R-fds
Requires:	R-deSolve
Requires:	R-flexmix
Requires:	R-prabclus
Requires:	R-diptest
Requires:	R-ggstats
Requires:	R-plyr
Requires:	R-progress
Requires:	R-RColorBrewer
Requires:	R-gridExtra
Requires:	R-DBI
Requires:	R-utf8
Requires:	R-DEoptimR
Requires:	R-perry
Requires:	R-mvtnorm
Requires:	R-pcaPP
Requires:	R-farver
Requires:	R-labeling
Requires:	R-viridisLite
Requires:	R-stringi
Requires:	R-pkgconfig
Requires:	R-purrr
Requires:	R-cpp11
Requires:	R-colorspace
Requires:	R-car
Requires:	R-sp
Requires:	R-vcd
Requires:	R-laeken
Requires:	R-ranger
Requires:	R-NADA
Requires:	R-truncnorm
Requires:	R-carData
Requires:	R-abind
Requires:	R-Formula
Requires:	R-pbkrtest
Requires:	R-quantreg
Requires:	R-lme4
Requires:	R-rainbow
Requires:	R-RCurl
Requires:	R-modeltools
Requires:	R-patchwork
Requires:	R-crayon
Requires:	R-hms
Requires:	R-prettyunits
Requires:	R-lmtest
Requires:	R-nloptr
Requires:	R-reformulas
Requires:	R-zoo
Requires:	R-broom
Requires:	R-doBy
Requires:	R-SparseM
Requires:	R-MatrixModels
Requires:	R-hdrcde
Requires:	R-ks
Requires:	R-bitops
Requires:	R-backports
Requires:	R-cowplot
Requires:	R-Deriv
Requires:	R-modelr
Requires:	R-microbenchmark
Requires:	R-locfit
Requires:	R-ash
Requires:	R-FNN
Requires:	R-multicool
Requires:	R-pracma
Requires:	R-Rdpack
Requires:	R-rbibutils
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-fastDummies
BuildRequires: 	R-survey
BuildRequires: 	R-robCompositions
BuildRequires: 	R-ggplot2
BuildRequires: 	R-forcats
BuildRequires: 	R-dplyr
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-data.table
BuildRequires: 	R-stringr
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-scales
BuildRequires: 	R-withr
BuildRequires: 	R-pls
BuildRequires: 	R-cvTools
BuildRequires: 	R-e1071
BuildRequires: 	R-fda
BuildRequires: 	R-rrcov
BuildRequires: 	R-fpc
BuildRequires: 	R-GGally
BuildRequires: 	R-ggfortify
BuildRequires: 	R-kernlab
BuildRequires: 	R-mclust
BuildRequires: 	R-tidyr
BuildRequires: 	R-robustbase
BuildRequires: 	R-robustHD
BuildRequires: 	R-VIM
BuildRequires: 	R-zCompositions
BuildRequires: 	R-reshape2
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-minqa
BuildRequires: 	R-numDeriv
BuildRequires: 	R-mitools
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-proxy
BuildRequires: 	R-fds
BuildRequires: 	R-deSolve-devel
BuildRequires: 	R-flexmix
BuildRequires: 	R-prabclus
BuildRequires: 	R-diptest
BuildRequires: 	R-ggstats
BuildRequires: 	R-plyr
BuildRequires: 	R-progress
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-gridExtra
BuildRequires: 	R-DBI
BuildRequires: 	R-utf8
BuildRequires: 	R-DEoptimR
BuildRequires: 	R-perry
BuildRequires: 	R-mvtnorm
BuildRequires: 	R-pcaPP
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-viridisLite
BuildRequires: 	R-stringi
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-purrr
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-colorspace
BuildRequires: 	R-car
BuildRequires: 	R-sp
BuildRequires: 	R-vcd
BuildRequires: 	R-laeken
BuildRequires: 	R-ranger
BuildRequires: 	R-NADA
BuildRequires: 	R-truncnorm
BuildRequires: 	R-carData
BuildRequires: 	R-abind
BuildRequires: 	R-Formula
BuildRequires: 	R-pbkrtest
BuildRequires: 	R-quantreg
BuildRequires: 	R-lme4
BuildRequires: 	R-rainbow
BuildRequires: 	R-RCurl
BuildRequires: 	R-modeltools
BuildRequires: 	R-patchwork
BuildRequires: 	R-crayon
BuildRequires: 	R-hms
BuildRequires: 	R-prettyunits
BuildRequires: 	R-lmtest
BuildRequires: 	R-nloptr
BuildRequires: 	R-reformulas
BuildRequires: 	R-zoo
BuildRequires: 	R-broom
BuildRequires: 	R-doBy
BuildRequires: 	R-SparseM
BuildRequires: 	R-MatrixModels
BuildRequires: 	R-hdrcde
BuildRequires: 	R-ks
BuildRequires: 	R-bitops
BuildRequires: 	R-backports
BuildRequires: 	R-cowplot
BuildRequires: 	R-Deriv
BuildRequires: 	R-modelr
BuildRequires: 	R-microbenchmark
BuildRequires: 	R-locfit
BuildRequires: 	R-ash
BuildRequires: 	R-FNN
BuildRequires: 	R-multicool
BuildRequires: 	R-pracma
BuildRequires: 	R-Rdpack
BuildRequires: 	R-rbibutils
 
%description 
A compositional mediation model for continuous outcome and binary 
outcomes to deal with mediators that are compositional data. Lin, 
Ziqiang et al. (2022) <doi:10.1016/j.jad.2021.12.019>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog