File R-CompAREdesign.spec of Package R-CompAREdesign

# Automatically generated by CRAN2OBS
# 
# Spec file for package CompAREdesign 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  CompAREdesign 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        2.4.0 
Release:        0 
Summary:        Statistical Functions for the Design of Studies with Composite Endpoints 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         CompAREdesign_2.4.0.tar.gz 
Requires:       R-base 
Requires:	R-copula
Requires:	R-ggplot2
Requires:	R-ggpubr
Requires:	R-rootSolve
Requires:	R-numDeriv
Requires:	R-colorspace
Requires:	R-gsl
Requires:	R-ADGofTest
Requires:	R-stabledist
Requires:	R-mvtnorm
Requires:	R-pcaPP
Requires:	R-pspline
Requires:	R-cli
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-lifecycle
Requires:	R-rlang
Requires:	R-S7
Requires:	R-scales
Requires:	R-vctrs
Requires:	R-withr
Requires:	R-ggrepel
Requires:	R-ggsci
Requires:	R-tidyr
Requires:	R-purrr
Requires:	R-dplyr
Requires:	R-cowplot
Requires:	R-ggsignif
Requires:	R-gridExtra
Requires:	R-glue
Requires:	R-polynom
Requires:	R-rstatix
Requires:	R-tibble
Requires:	R-magrittr
Requires:	R-generics
Requires:	R-pillar
Requires:	R-R6
Requires:	R-tidyselect
Requires:	R-Rcpp
Requires:	R-broom
Requires:	R-corrplot
Requires:	R-car
Requires:	R-farver
Requires:	R-labeling
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-pkgconfig
Requires:	R-stringr
Requires:	R-cpp11
Requires:	R-backports
Requires:	R-carData
Requires:	R-abind
Requires:	R-Formula
Requires:	R-pbkrtest
Requires:	R-quantreg
Requires:	R-lme4
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-minqa
Requires:	R-nloptr
Requires:	R-reformulas
Requires:	R-RcppEigen
Requires:	R-doBy
Requires:	R-SparseM
Requires:	R-MatrixModels
Requires:	R-Deriv
Requires:	R-modelr
Requires:	R-microbenchmark
Requires:	R-Rdpack
Requires:	R-rbibutils
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-copula
BuildRequires: 	R-ggplot2
BuildRequires: 	R-ggpubr
BuildRequires: 	R-rootSolve
BuildRequires: 	R-numDeriv
BuildRequires: 	R-colorspace
BuildRequires: 	R-gsl
BuildRequires: 	R-ADGofTest
BuildRequires: 	R-stabledist
BuildRequires: 	R-mvtnorm
BuildRequires: 	R-pcaPP
BuildRequires: 	R-pspline
BuildRequires: 	R-cli
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-lifecycle
BuildRequires: 	R-rlang
BuildRequires: 	R-S7
BuildRequires: 	R-scales
BuildRequires: 	R-vctrs
BuildRequires: 	R-withr
BuildRequires: 	R-ggrepel
BuildRequires: 	R-ggsci
BuildRequires: 	R-tidyr
BuildRequires: 	R-purrr
BuildRequires: 	R-dplyr
BuildRequires: 	R-cowplot
BuildRequires: 	R-ggsignif
BuildRequires: 	R-gridExtra
BuildRequires: 	R-glue
BuildRequires: 	R-polynom
BuildRequires: 	R-rstatix
BuildRequires: 	R-tibble
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BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-broom
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BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-stringr
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BuildRequires: 	R-backports
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BuildRequires: 	R-abind
BuildRequires: 	R-Formula
BuildRequires: 	R-pbkrtest
BuildRequires: 	R-quantreg
BuildRequires: 	R-lme4
BuildRequires: 	R-utf8
BuildRequires: 	R-stringi
BuildRequires: 	R-minqa
BuildRequires: 	R-nloptr
BuildRequires: 	R-reformulas
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-doBy
BuildRequires: 	R-SparseM
BuildRequires: 	R-MatrixModels
BuildRequires: 	R-Deriv
BuildRequires: 	R-modelr
BuildRequires: 	R-microbenchmark
BuildRequires: 	R-Rdpack
BuildRequires: 	R-rbibutils
 
Suggests:	R-knitr
Suggests:	R-rmarkdown
%description 
It has been designed to calculate the required sample size in 
randomized clinical trials with composite endpoints. It also calculates 
the expected effect and the probability of observing the composite 
endpoint, among others. The methodology can be found in Bofill & Gómez 
(2019) <doi:10.1002/sim.8092> and Gómez & Lagakos (2013) 
<doi:10.1002/sim.5547>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog