File R-EcotoneFinder.spec of Package R-EcotoneFinder

# Automatically generated by CRAN2OBS
# 
# Spec file for package EcotoneFinder 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  EcotoneFinder 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.2.3 
Release:        0 
Summary:        Characterising and Locating Ecotones and Communities 
Group:          Development/Libraries/Other 
License:        MIT + file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         EcotoneFinder_0.2.3.tar.gz 
Requires:       R-base 
Requires:	R-colorspace
Requires:	R-corrplot
Requires:	R-e1071
Requires:	R-ggplot2
Requires:	R-qgraph
Requires:	R-igraph
Requires:	R-philentropy
Requires:	R-plyr
Requires:	R-purrr
Requires:	R-reshape
Requires:	R-rlang
Requires:	R-Rmisc
Requires:	R-vegan
Requires:	R-vegclust
Requires:	R-withr
Requires:	R-proxy
Requires:	R-cli
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-lifecycle
Requires:	R-S7
Requires:	R-scales
Requires:	R-vctrs
Requires:	R-magrittr
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-Rcpp
Requires:	R-poorman
Requires:	R-psych
Requires:	R-lavaan
Requires:	R-Hmisc
Requires:	R-jpeg
Requires:	R-png
Requires:	R-corpcor
Requires:	R-reshape2
Requires:	R-glasso
Requires:	R-fdrtool
Requires:	R-gtools
Requires:	R-pbapply
Requires:	R-abind
Requires:	R-permute
Requires:	R-glue
Requires:	R-gridExtra
Requires:	R-data.table
Requires:	R-htmlTable
Requires:	R-viridis
Requires:	R-htmltools
Requires:	R-base64enc
Requires:	R-rmarkdown
Requires:	R-knitr
Requires:	R-Formula
Requires:	R-mnormt
Requires:	R-pbivnorm
Requires:	R-numDeriv
Requires:	R-quadprog
Requires:	R-GPArotation
Requires:	R-stringr
Requires:	R-farver
Requires:	R-labeling
Requires:	R-R6
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-checkmate
Requires:	R-htmlwidgets
Requires:	R-rstudioapi
Requires:	R-digest
Requires:	R-fastmap
Requires:	R-evaluate
Requires:	R-highr
Requires:	R-xfun
Requires:	R-yaml
Requires:	R-bslib
Requires:	R-fontawesome
Requires:	R-jquerylib
Requires:	R-jsonlite
Requires:	R-tinytex
Requires:	R-stringi
Requires:	R-cachem
Requires:	R-memoise
Requires:	R-mime
Requires:	R-sass
Requires:	R-backports
Requires:	R-fs
Requires:	R-rappdirs
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-colorspace
BuildRequires: 	R-corrplot
BuildRequires: 	R-e1071
BuildRequires: 	R-ggplot2
BuildRequires: 	R-qgraph
BuildRequires: 	R-igraph
BuildRequires: 	R-philentropy
BuildRequires: 	R-plyr
BuildRequires: 	R-purrr
BuildRequires: 	R-reshape
BuildRequires: 	R-rlang
BuildRequires: 	R-Rmisc
BuildRequires: 	R-vegan
BuildRequires: 	R-vegclust
BuildRequires: 	R-withr
BuildRequires: 	R-proxy
BuildRequires: 	R-cli
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-lifecycle
BuildRequires: 	R-S7
BuildRequires: 	R-scales
BuildRequires: 	R-vctrs
BuildRequires: 	R-magrittr
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-poorman
BuildRequires: 	R-psych
BuildRequires: 	R-lavaan
BuildRequires: 	R-Hmisc
BuildRequires: 	R-jpeg
BuildRequires: 	R-png
BuildRequires: 	R-corpcor
BuildRequires: 	R-reshape2
BuildRequires: 	R-glasso
BuildRequires: 	R-fdrtool
BuildRequires: 	R-gtools
BuildRequires: 	R-pbapply
BuildRequires: 	R-abind
BuildRequires: 	R-permute
BuildRequires: 	R-glue
BuildRequires: 	R-gridExtra
BuildRequires: 	R-data.table
BuildRequires: 	R-htmlTable
BuildRequires: 	R-viridis
BuildRequires: 	R-htmltools
BuildRequires: 	R-base64enc
BuildRequires: 	R-rmarkdown
BuildRequires: 	R-knitr
BuildRequires: 	R-Formula
BuildRequires: 	R-mnormt
BuildRequires: 	R-pbivnorm
BuildRequires: 	R-numDeriv
BuildRequires: 	R-quadprog
BuildRequires: 	R-GPArotation
BuildRequires: 	R-stringr
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-R6
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-checkmate
BuildRequires: 	R-htmlwidgets
BuildRequires: 	R-rstudioapi
BuildRequires: 	R-digest
BuildRequires: 	R-fastmap
BuildRequires: 	R-evaluate
BuildRequires: 	R-highr
BuildRequires: 	R-xfun
BuildRequires: 	R-yaml
BuildRequires: 	R-bslib
BuildRequires: 	R-fontawesome
BuildRequires: 	R-jquerylib
BuildRequires: 	R-jsonlite
BuildRequires: 	R-tinytex
BuildRequires: 	R-stringi
BuildRequires: 	R-cachem
BuildRequires: 	R-memoise
BuildRequires: 	R-mime
BuildRequires: 	R-sass
BuildRequires: 	R-backports
BuildRequires: 	R-fs
BuildRequires: 	R-rappdirs
 
Suggests:	R-testthat
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-bookdown
%description 
Analytical methods to locate and characterise ecotones, ecosystems and 
environmental patchiness along ecological gradients. Methods are 
implemented for isolated sampling or for space/time series. It includes 
Detrended Correspondence Analysis (Hill & Gauch (1980) 
<doi:10.1007/BF00048870>), fuzzy clustering (De Cáceres et al. (2010) 
<doi:10.1080/01621459.1963.10500845>), biodiversity indices (Jost 
(2006) <doi:10.1111/j.2006.0030-1299.14714.x>), and network analyses 
(Epskamp et al. (2012) <doi:10.18637/jss.v048.i04>) - as well as tools 
to explore the number of clusters in the data. Functions to produce 
synthetic ecological datasets are also provided. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog