File R-GeneNMF.spec of Package R-GeneNMF

# Automatically generated by CRAN2OBS
# 
# Spec file for package GeneNMF 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
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%global packname  GeneNMF 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.8.0 
Release:        0 
Summary:        Non-Negative Matrix Factorization for Single-Cell Omics 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         GeneNMF_0.8.0.tar.gz 
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Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-fgsea
Suggests:	R-msigdbr
%description 
A collection of methods to extract gene programs from single-cell gene 
expression data using non-negative matrix factorization (NMF). 
'GeneNMF' contains functions to directly interact with the 'Seurat' 
toolkit and derive interpretable gene program signatures. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.Rd
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/RSticker_GeneNMF.png
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog