File R-INLAjoint.spec of Package R-INLAjoint

# Automatically generated by CRAN2OBS
# 
# Spec file for package INLAjoint 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
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# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  INLAjoint 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        25.11.10 
Release:        0 
Summary:        Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with 'INLA' 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         INLAjoint_25.11.10.tar.gz 
Requires:       R-base 
Requires:	R-numDeriv
Requires:	R-lme4
Requires:	R-ggplot2
Requires:	R-data.table
Requires:	R-cli
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-lifecycle
Requires:	R-rlang
Requires:	R-S7
Requires:	R-scales
Requires:	R-vctrs
Requires:	R-withr
Requires:	R-minqa
Requires:	R-nloptr
Requires:	R-reformulas
Requires:	R-Rcpp
Requires:	R-RcppEigen
Requires:	R-glue
Requires:	R-Rdpack
Requires:	R-farver
Requires:	R-labeling
Requires:	R-R6
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-rbibutils
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-numDeriv
BuildRequires: 	R-lme4
BuildRequires: 	R-ggplot2
BuildRequires: 	R-data.table
BuildRequires: 	R-cli
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-lifecycle
BuildRequires: 	R-rlang
BuildRequires: 	R-S7
BuildRequires: 	R-scales
BuildRequires: 	R-vctrs
BuildRequires: 	R-withr
BuildRequires: 	R-minqa
BuildRequires: 	R-nloptr
BuildRequires: 	R-reformulas
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-glue
BuildRequires: 	R-Rdpack
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-R6
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-rbibutils
 
Suggests:	R-INLA
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-R.rsp
Suggests:	R-JMbayes2
Suggests:	R-rstanarm
Suggests:	R-frailtypack
Suggests:	R-smcure
Suggests:	R-fmesher
%description 
Estimation of joint models for multivariate longitudinal markers (with 
various distributions available) and survival outcomes (possibly 
accounting for competing risks) with Integrated Nested Laplace 
Approximations (INLA). The flexible and user friendly function joint() 
facilitates the use of the fast and reliable inference technique 
implemented in the 'INLA' package for joint modeling. More details are 
given in the help page of the joint() function (accessible via ?joint 
in the R console) and the vignette associated to the joint() function 
(accessible via vignette("INLAjoint") in the R console). 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog