File R-MBNMAdose.spec of Package R-MBNMAdose

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File R-MBNMAdose.spec of Package R-MBNMAdose

# Automatically generated by CRAN2OBS
# 
# Spec file for package MBNMAdose 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2024 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  MBNMAdose 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.4.3 
Release:        0 
Summary:        Dose-Response MBNMA Models 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         MBNMAdose_0.4.3.tar.gz 
Requires:       R-base 
Requires:	R-scales
Requires:	R-dplyr
Requires:	R-R2jags
Requires:	R-rjags
Requires:	R-magrittr
Requires:	R-checkmate
Requires:	R-Rdpack
Requires:	R-igraph
Requires:	R-reshape2
Requires:	R-backports
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-abind
Requires:	R-coda
Requires:	R-R2WinBUGS
Requires:	R-stringr
Requires:	R-rbibutils
Requires:	R-plyr
Requires:	R-Rcpp
Requires:	R-farver
Requires:	R-labeling
Requires:	R-munsell
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-colorspace
Requires:	R-fansi
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-withr
Requires:	jags
Requires:	jags-devel
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-scales
BuildRequires: 	R-dplyr
BuildRequires: 	R-R2jags
BuildRequires: 	R-rjags
BuildRequires: 	R-magrittr
BuildRequires: 	R-checkmate
BuildRequires: 	R-Rdpack
BuildRequires: 	R-igraph
BuildRequires: 	R-reshape2
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Suggests:	R-overlapping
Suggests:	R-ggplot2
Suggests:	R-RColorBrewer
Suggests:	R-mcmcplots
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Suggests:	R-testthat
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Suggests:	R-forestplot
Suggests:	R-ggdist
Suggests:	R-zoo
Suggests:	R-lspline
Suggests:	R-formatR
Suggests:	R-netmeta
Suggests:	R-knitr
Suggests:	R-rmarkdown
%description 
Fits Bayesian dose-response model-based network meta-analysis (MBNMA) 
that incorporate multiple doses within an agent by modelling different 
dose-response functions, as described by Mawdsley et al. (2016) 
<doi:10.1002/psp4.12091>. By modelling dose-response relationships this 
can connect networks of evidence that might otherwise be disconnected, 
and can improve precision on treatment estimates. Several common 
dose-response functions are provided; others may be added by the user. 
Various characteristics and assumptions can be flexibly added to the 
models, such as shared class effects. The consistency of direct and 
indirect evidence in the network can be assessed using unrelated mean 
effects models and/or by node-splitting at the treatment level. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/REFERENCES.bib
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog

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File R-MBNMAdose.spec of Package R-MBNMAdose

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