File R-MBNMAtime.spec of Package R-MBNMAtime

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File R-MBNMAtime.spec of Package R-MBNMAtime

# Automatically generated by CRAN2OBS
# 
# Spec file for package MBNMAtime 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2024 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  MBNMAtime 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.2.4 
Release:        0 
Summary:        Run Time-Course Model-Based Network Meta-Analysis (MBNMA) Models 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         MBNMAtime_0.2.4.tar.gz 
Requires:       R-base 
Requires:	R-knitr
Requires:	R-gridExtra
Requires:	R-dplyr
Requires:	R-R2jags
Requires:	R-rjags
Requires:	R-reshape2
Requires:	R-magrittr
Requires:	R-checkmate
Requires:	R-Rdpack
Requires:	R-backports
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-gtable
Requires:	R-evaluate
Requires:	R-highr
Requires:	R-xfun
Requires:	R-yaml
Requires:	R-abind
Requires:	R-coda
Requires:	R-R2WinBUGS
Requires:	R-stringr
Requires:	R-rbibutils
Requires:	R-plyr
Requires:	R-Rcpp
Requires:	R-fansi
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-pkgconfig
Requires:	R-withr
Requires:	jags
Requires:	jags-devel
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-knitr
BuildRequires: 	R-gridExtra
BuildRequires: 	R-dplyr
BuildRequires: 	R-R2jags
BuildRequires: 	R-rjags
BuildRequires: 	R-reshape2
BuildRequires: 	R-magrittr
BuildRequires: 	R-checkmate
BuildRequires: 	R-Rdpack
BuildRequires: 	R-backports
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-gtable
BuildRequires: 	R-evaluate
BuildRequires: 	R-highr
BuildRequires: 	R-xfun
BuildRequires: 	R-yaml
BuildRequires: 	R-abind
BuildRequires: 	R-coda
BuildRequires: 	R-R2WinBUGS
BuildRequires: 	R-stringr
BuildRequires: 	R-rbibutils
BuildRequires: 	R-plyr
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-fansi
BuildRequires: 	R-utf8
BuildRequires: 	R-stringi
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-withr
BuildRequires: 	jags
BuildRequires: 	jags-devel
 
Suggests:	R-scales
Suggests:	R-overlapping
Suggests:	R-ggplot2
Suggests:	R-ggdist
Suggests:	R-igraph
Suggests:	R-crayon
Suggests:	R-Hmisc
Suggests:	R-lspline
Suggests:	R-zoo
Suggests:	R-rmarkdown
Suggests:	R-png
Suggests:	R-testthat
Suggests:	R-RColorBrewer
Suggests:	R-mcmcplots
%description 
Fits Bayesian time-course models for model-based network meta-analysis 
(MBNMA) that allows inclusion of multiple time-points from studies. 
Repeated measures over time are accounted for within studies by 
applying different time-course functions, following the method of 
Pedder et al. (2019) <doi:10.1002/jrsm.1351>. The method allows 
synthesis of studies with multiple follow-up measurements that can 
account for time-course for a single or multiple treatment comparisons. 
Several general time-course functions are provided; others may be added 
by the user. Various characteristics can be flexibly added to the 
models, such as correlation between time points and shared class 
effects. The consistency of direct and indirect evidence in the network 
can be assessed using unrelated mean effects models and/or by 
node-splitting. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/REFERENCES.bib
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%{rlibdir}/%{packname}/extdata
%{rlibdir}/%{packname}/figures
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/
 
%changelog

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File R-MBNMAtime.spec of Package R-MBNMAtime

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