File R-MRMCaov.spec of Package R-MRMCaov
# Automatically generated by CRAN2OBS
#
# Spec file for package MRMCaov
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
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%global packname MRMCaov
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 0.3.1
Release: 0
Summary: Multi-Reader Multi-Case Analysis of Variance
Group: Development/Libraries/Other
License: GPL-3
URL: http://cran.r-project.org/web/packages/%{packname}
Source: MRMCaov_0.3.1.tar.gz
Requires: R-base
Requires: R-ggplot2
Requires: R-mvtnorm
Requires: R-progress
Requires: R-tibble
Requires: R-trust
Requires: R-cli
Requires: R-gtable
Requires: R-isoband
Requires: R-lifecycle
Requires: R-rlang
Requires: R-S7
Requires: R-scales
Requires: R-vctrs
Requires: R-withr
Requires: R-crayon
Requires: R-hms
Requires: R-prettyunits
Requires: R-R6
Requires: R-magrittr
Requires: R-pillar
Requires: R-pkgconfig
Requires: R-glue
Requires: R-cpp11
Requires: R-utf8
Requires: R-farver
Requires: R-labeling
Requires: R-RColorBrewer
Requires: R-viridisLite
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-ggplot2
BuildRequires: R-mvtnorm
BuildRequires: R-progress
BuildRequires: R-tibble
BuildRequires: R-trust
BuildRequires: R-cli
BuildRequires: R-gtable
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-rlang
BuildRequires: R-S7
BuildRequires: R-scales
BuildRequires: R-vctrs
BuildRequires: R-withr
BuildRequires: R-crayon
BuildRequires: R-hms
BuildRequires: R-prettyunits
BuildRequires: R-R6
BuildRequires: R-magrittr
BuildRequires: R-pillar
BuildRequires: R-pkgconfig
BuildRequires: R-glue
BuildRequires: R-cpp11-devel
BuildRequires: R-utf8
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
Suggests: R-knitr
Suggests: R-rmarkdown
%description
Estimation and comparison of the performances of diagnostic tests in
multi-reader multi-case studies where true case statuses (or ground
truths) are known and one or more readers provide test ratings for
multiple cases. Reader performance metrics are provided for area under
and expected utility of ROC curves, likelihood ratio of positive or
negative tests, and sensitivity and specificity. ROC curves can be
estimated empirically or with binormal or binormal likelihood-ratio
models. Statistical comparisons of diagnostic tests are based on the
ANOVA model of Obuchowski-Rockette and the unified framework of Hillis
(2005) <doi:10.1002/sim.2024>. The ANOVA can be conducted with data
from a full factorial, nested, or partially paired study design; with
random or fixed readers or cases; and covariances estimated with the
DeLong method, jackknifing, or an unbiased method. Smith and Hillis
(2020) <doi:10.1117/12.2549075>.
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog
