File R-PopGenReport.spec of Package R-PopGenReport

# Automatically generated by CRAN2OBS
# 
# Spec file for package PopGenReport 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  PopGenReport 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        3.1.3 
Release:        0 
Summary:        A Simple Framework to Analyse Population and Landscape Genetic Data 
Group:          Development/Libraries/Other 
License:        GPL 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         PopGenReport_3.1.3.tar.gz 
Requires:       R-base 
Requires:	R-knitr
Requires:	R-adegenet
Requires:	R-RgoogleMaps
Requires:	R-gap
Requires:	R-calibrate
Requires:	R-xtable
Requires:	R-plyr
Requires:	R-dismo
Requires:	R-reshape2
Requires:	R-ggplot2
Requires:	R-R.utils
Requires:	R-ade4
Requires:	R-pegas
Requires:	R-genetics
Requires:	R-gdistance
Requires:	R-vegan
Requires:	R-sp
Requires:	R-mmod
Requires:	R-GGally
Requires:	R-raster
Requires:	R-pixmap
Requires:	R-Rcpp
Requires:	R-RcppArmadillo
Requires:	R-igraph
Requires:	R-ape
Requires:	R-shiny
Requires:	R-seqinr
Requires:	R-dplyr
Requires:	R-terra
Requires:	R-gap.datasets
Requires:	R-plotly
Requires:	R-Rdpack
Requires:	R-combinat
Requires:	R-gdata
Requires:	R-gtools
Requires:	R-mvtnorm
Requires:	R-cli
Requires:	R-ggstats
Requires:	R-gtable
Requires:	R-lifecycle
Requires:	R-magrittr
Requires:	R-progress
Requires:	R-RColorBrewer
Requires:	R-rlang
Requires:	R-S7
Requires:	R-scales
Requires:	R-tidyr
Requires:	R-isoband
Requires:	R-vctrs
Requires:	R-withr
Requires:	R-evaluate
Requires:	R-highr
Requires:	R-xfun
Requires:	R-yaml
Requires:	R-R.oo
Requires:	R-R.methodsS3
Requires:	R-stringr
Requires:	R-png
Requires:	R-permute
Requires:	R-digest
Requires:	R-generics
Requires:	R-glue
Requires:	R-pillar
Requires:	R-R6
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-forcats
Requires:	R-patchwork
Requires:	R-purrr
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-httr
Requires:	R-jsonlite
Requires:	R-viridisLite
Requires:	R-base64enc
Requires:	R-htmltools
Requires:	R-htmlwidgets
Requires:	R-lazyeval
Requires:	R-crosstalk
Requires:	R-data.table
Requires:	R-promises
Requires:	R-crayon
Requires:	R-hms
Requires:	R-prettyunits
Requires:	R-rbibutils
Requires:	R-farver
Requires:	R-labeling
Requires:	R-segmented
Requires:	R-httpuv
Requires:	R-mime
Requires:	R-fontawesome
Requires:	R-sourcetools
Requires:	R-later
Requires:	R-fastmap
Requires:	R-commonmark
Requires:	R-bslib
Requires:	R-cachem
Requires:	R-stringi
Requires:	R-jquerylib
Requires:	R-memoise
Requires:	R-sass
Requires:	R-rmarkdown
Requires:	R-curl
Requires:	R-openssl
Requires:	R-utf8
Requires:	R-otel
Requires:	R-askpass
Requires:	R-tinytex
Requires:	R-fs
Requires:	R-rappdirs
Requires:	R-sys
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-knitr
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BuildRequires: 	R-RgoogleMaps
BuildRequires: 	R-gap
BuildRequires: 	R-calibrate
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BuildRequires: 	R-fs
BuildRequires: 	R-rappdirs
BuildRequires: 	R-sys
 
Suggests:	R-sf
%description 
Provides beginner friendly framework to analyse population genetic 
data. Based on 'adegenet' objects it uses 'knitr' to create 
comprehensive reports on spatial genetic data. For detailed information 
how to use the package refer to the comprehensive tutorials or visit 
<http://www.popgenreport.org/>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%{rlibdir}/%{packname}/extdata
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/swchunks
 
%changelog