Overview

File R-QurvE.spec of Package R-QurvE

# Automatically generated by CRAN2OBS
# 
# Spec file for package QurvE 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
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%global packname  QurvE 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.1.2 
Release:        0 
Summary:        Robust and User-Friendly Analysis of Growth and Fluorescence Curves 
Group:          Development/Libraries/Other 
License:        GPL (>= 3) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         QurvE_1.1.2.tar.gz 
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%description 
High-throughput analysis of growth curves and fluorescence data using 
three methods: linear regression, growth model fitting, and smooth 
spline fit. Analysis of dose-response relationships via smoothing 
splines or dose-response models. Complete data analysis workflows can 
be executed in a single step via user-friendly wrapper functions. The 
results of these workflows are summarized in detailed reports as well 
as intuitively navigable 'R' data containers. A 'shiny' application 
provides access to all features without requiring any programming 
knowledge. The package is described in further detail in Wirth et al. 
(2023) <doi:10.1038/s41596-023-00850-7>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/2-FMA_toxicity.csv
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/Report_Fluorescence.Rmd
%{rlibdir}/%{packname}/Report_Growth.Rmd
%doc %{rlibdir}/%{packname}/doc
%{rlibdir}/%{packname}/fluorescence_test_Gen5.xlsx
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/lac_promoters.xls
%{rlibdir}/%{packname}/lac_promoters_fluorescence.txt
%{rlibdir}/%{packname}/lac_promoters_growth.txt
%{rlibdir}/%{packname}/nivo_output.csv
%{rlibdir}/%{packname}/shiny_app
%{rlibdir}/%{packname}/shiny_manuals
%{rlibdir}/%{packname}/victorx3_output.txt
 
%changelog
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