Overview

File R-RISCA.spec of Package R-RISCA

# Automatically generated by CRAN2OBS
# 
# Spec file for package RISCA 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
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%global packname  RISCA 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.7 
Release:        0 
Summary:        Causal Inference and Prediction in Cohort-Based Analyses 
Group:          Development/Libraries/Other 
License:        GPL (>= 2) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         RISCA_1.0.7.tar.gz 
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%description 
Numerous functions for cohort-based analyses, either for prediction or 
causal inference. For causal inference, it includes Inverse Probability 
Weighting and G-computation for marginal estimation of an exposure 
effect when confounders are expected. We deal with binary outcomes, 
times-to-events, competing events, and multi-state data. For multistate 
data, semi-Markov model with interval censoring may be considered, and 
we propose the possibility to consider the excess of mortality related 
to the disease compared to reference lifetime tables. For predictive 
studies, we propose a set of functions to estimate time-dependent 
receiver operating characteristic (ROC) curves with the possible 
consideration of right-censoring times-to-events or the presence of 
confounders. Finally, several functions are available to assess 
time-dependent ROC curves or survival curves from aggregated data. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog
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