File R-SurvivalClusteringTree.spec of Package R-SurvivalClusteringTree

# Automatically generated by CRAN2OBS
# 
# Spec file for package SurvivalClusteringTree 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  SurvivalClusteringTree 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.1.1 
Release:        0 
Summary:        Clustering Analysis Using Survival Tree and Forest Algorithms 
Group:          Development/Libraries/Other 
License:        GPL (>= 2) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         SurvivalClusteringTree_1.1.1.tar.gz 
Requires:       R-base 
Requires:	R-Rcpp
Requires:	R-dplyr
Requires:	R-gridtext
Requires:	R-formula.tools
Requires:	R-RcppArmadillo
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-operator.tools
Requires:	R-curl
Requires:	R-markdown
Requires:	R-png
Requires:	R-jpeg
Requires:	R-stringr
Requires:	R-xml2
Requires:	R-xfun
Requires:	R-litedown
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-pkgconfig
Requires:	R-withr
Requires:	R-commonmark
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-dplyr
BuildRequires: 	R-gridtext
BuildRequires: 	R-formula.tools
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-operator.tools
BuildRequires: 	R-curl
BuildRequires: 	R-markdown
BuildRequires: 	R-png
BuildRequires: 	R-jpeg
BuildRequires: 	R-stringr
BuildRequires: 	R-xml2
BuildRequires: 	R-xfun
BuildRequires: 	R-litedown
BuildRequires: 	R-utf8
BuildRequires: 	R-stringi
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-withr
BuildRequires: 	R-commonmark
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-tinytest
%description 
An outcome-guided algorithm is developed to identify clusters of 
samples with similar characteristics and survival rate. The algorithm 
first builds a random forest and then defines distances between samples 
based on the fitted random forest. Given the distances, we can apply 
hierarchical clustering algorithms to define clusters. Details about 
this method is described in 
<https://github.com/luyouepiusf/SurvivalClusteringTree>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
 
%changelog