File R-TPD.spec of Package R-TPD
# Automatically generated by CRAN2OBS
#
# Spec file for package TPD
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
#
# Copyright (c) 2026 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
#
# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%global packname TPD
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 1.1.0
Release: 0
Summary: Methods for Measuring Functional Diversity Based on Trait Probability Density
Group: Development/Libraries/Other
License: GPL-3
URL: http://cran.r-project.org/web/packages/%{packname}
Source: TPD_1.1.0.tar.gz
Requires: R-base
Requires: R-ggplot2
Requires: R-ks
Requires: R-gridExtra
Requires: R-mvtnorm
Requires: R-cli
Requires: R-gtable
Requires: R-isoband
Requires: R-lifecycle
Requires: R-rlang
Requires: R-S7
Requires: R-scales
Requires: R-vctrs
Requires: R-withr
Requires: R-FNN
Requires: R-kernlab
Requires: R-mclust
Requires: R-multicool
Requires: R-pracma
Requires: R-glue
Requires: R-cpp11
Requires: R-Rcpp
Requires: R-farver
Requires: R-labeling
Requires: R-R6
Requires: R-RColorBrewer
Requires: R-viridisLite
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-ggplot2
BuildRequires: R-ks
BuildRequires: R-gridExtra
BuildRequires: R-mvtnorm
BuildRequires: R-cli
BuildRequires: R-gtable
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-rlang
BuildRequires: R-S7
BuildRequires: R-scales
BuildRequires: R-vctrs
BuildRequires: R-withr
BuildRequires: R-FNN
BuildRequires: R-kernlab
BuildRequires: R-mclust
BuildRequires: R-multicool
BuildRequires: R-pracma
BuildRequires: R-glue
BuildRequires: R-cpp11-devel
BuildRequires: R-Rcpp-devel
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-R6
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
Suggests: R-knitr
Suggests: R-testthat
Suggests: R-rmarkdown
%description
Tools to calculate trait probability density functions (TPD) at any
scale (e.g. populations, species, communities). TPD functions are used
to compute several indices of functional diversity, as well as its
partition across scales. These indices constitute a unified framework
that incorporates the underlying probabilistic nature of trait
distributions into uni- or multidimensional functional trait-based
studies. See Carmona et al. (2016) <doi:10.1016/j.tree.2016.02.003> for
further information.
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog
