File R-TwoTimeScales.spec of Package R-TwoTimeScales

# Automatically generated by CRAN2OBS
# 
# Spec file for package TwoTimeScales 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
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%global packname  TwoTimeScales 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.0 
Release:        0 
Summary:        Analysis of Event Data with Two Time Scales 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         TwoTimeScales_1.0.0.tar.gz 
Requires:       R-base 
Requires:	R-colorspace
Requires:	R-Epi
Requires:	R-fields
Requires:	R-JOPS
Requires:	R-LMMsolver
Requires:	R-popEpi
Requires:	R-reshape2
Requires:	R-spam
Requires:	R-ucminf
Requires:	R-viridis
Requires:	R-cmprsk
Requires:	R-etm
Requires:	R-plyr
Requires:	R-dplyr
Requires:	R-numDeriv
Requires:	R-data.table
Requires:	R-zoo
Requires:	R-magrittr
Requires:	R-viridisLite
Requires:	R-RColorBrewer
Requires:	R-maps
Requires:	R-SpATS
Requires:	R-fds
Requires:	R-ggplot2
Requires:	R-Rcpp
Requires:	R-stringr
Requires:	R-dotCall64
Requires:	R-gridExtra
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-RcppArmadillo
Requires:	R-rainbow
Requires:	R-RCurl
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-S7
Requires:	R-scales
Requires:	R-withr
Requires:	R-stringi
Requires:	R-utf8
Requires:	R-pcaPP
Requires:	R-hdrcde
Requires:	R-ks
Requires:	R-bitops
Requires:	R-farver
Requires:	R-labeling
Requires:	R-pkgconfig
Requires:	R-locfit
Requires:	R-ash
Requires:	R-FNN
Requires:	R-kernlab
Requires:	R-mclust
Requires:	R-multicool
Requires:	R-mvtnorm
Requires:	R-pracma
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-colorspace
BuildRequires: 	R-Epi
BuildRequires: 	R-fields
BuildRequires: 	R-JOPS
BuildRequires: 	R-LMMsolver
BuildRequires: 	R-popEpi
BuildRequires: 	R-reshape2
BuildRequires: 	R-spam
BuildRequires: 	R-ucminf
BuildRequires: 	R-viridis
BuildRequires: 	R-cmprsk
BuildRequires: 	R-etm
BuildRequires: 	R-plyr
BuildRequires: 	R-dplyr
BuildRequires: 	R-numDeriv
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BuildRequires: 	R-zoo
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BuildRequires: 	R-mclust
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BuildRequires: 	R-mvtnorm
BuildRequires: 	R-pracma
 
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-testthat
%description 
Analyse time to event data with two time scales by estimating a smooth 
hazard that varies over two time scales and also, if covariates are 
available, to estimate a proportional hazards model with such a 
two-dimensional baseline hazard. Functions are provided to prepare the 
raw data for estimation, to estimate and to plot the two-dimensional 
smooth hazard. Extension to a competing risks model are implemented. 
For details about the method please refer to Carollo et al. (2024) 
<doi:10.1002/sim.10297>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog