File R-adapt3.spec of Package R-adapt3

# Automatically generated by CRAN2OBS
# 
# Spec file for package adapt3 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  adapt3 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.1 
Release:        0 
Summary:        Adaptive Dynamics and Community Matrix Model Projections 
Group:          Development/Libraries/Other 
License:        GPL (>= 2) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         adapt3_1.0.1.tar.gz 
Requires:       R-base 
Requires:	R-Rcpp
Requires:	R-lefko3
Requires:	R-rlang
Requires:	R-RcppArmadillo
Requires:	R-BH
Requires:	R-glmmTMB
Requires:	R-lme4
Requires:	R-MuMIn
Requires:	R-pscl
Requires:	R-VGAM
Requires:	R-TMB
Requires:	R-numDeriv
Requires:	R-reformulas
Requires:	R-pbkrtest
Requires:	R-sandwich
Requires:	R-RcppEigen
Requires:	R-minqa
Requires:	R-nloptr
Requires:	R-insight
Requires:	R-broom
Requires:	R-dplyr
Requires:	R-doBy
Requires:	R-Rdpack
Requires:	R-zoo
Requires:	R-backports
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-purrr
Requires:	R-stringr
Requires:	R-tibble
Requires:	R-tidyr
Requires:	R-cowplot
Requires:	R-Deriv
Requires:	R-ggplot2
Requires:	R-modelr
Requires:	R-microbenchmark
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-R6
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-rbibutils
Requires:	R-gtable
Requires:	R-scales
Requires:	R-isoband
Requires:	R-S7
Requires:	R-withr
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-farver
Requires:	R-labeling
Requires:	R-RColorBrewer
Requires:	R-viridisLite
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-lefko3
BuildRequires: 	R-rlang
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-BH-devel
BuildRequires: 	R-glmmTMB
BuildRequires: 	R-lme4
BuildRequires: 	R-MuMIn
BuildRequires: 	R-pscl
BuildRequires: 	R-VGAM
BuildRequires: 	R-TMB-devel
BuildRequires: 	R-numDeriv
BuildRequires: 	R-reformulas
BuildRequires: 	R-pbkrtest
BuildRequires: 	R-sandwich
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-minqa
BuildRequires: 	R-nloptr
BuildRequires: 	R-insight
BuildRequires: 	R-broom
BuildRequires: 	R-dplyr
BuildRequires: 	R-doBy
BuildRequires: 	R-Rdpack
BuildRequires: 	R-zoo
BuildRequires: 	R-backports
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-purrr
BuildRequires: 	R-stringr
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyr
BuildRequires: 	R-cowplot
BuildRequires: 	R-Deriv
BuildRequires: 	R-ggplot2
BuildRequires: 	R-modelr
BuildRequires: 	R-microbenchmark
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-rbibutils
BuildRequires: 	R-gtable
BuildRequires: 	R-scales
BuildRequires: 	R-isoband
BuildRequires: 	R-S7
BuildRequires: 	R-withr
BuildRequires: 	R-utf8
BuildRequires: 	R-stringi
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-knitr
Suggests:	R-rmarkdown
%description 
Runs projections of groups of matrix projection models (MPMs), allowing 
density dependence mechanisms to work across MPMs. This package was 
developed to run both adaptive dynamics simulations such as pairwise 
and multiple invasibility analyses, and community projections in which 
species are represented by MPMs. All forms of MPMs are allowed, 
including integral projection models (IPMs). Also includes 
individual-based modeling (IBM) versions of these. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/include
%{rlibdir}/%{packname}/libs
 
%changelog