File R-bamdit.spec of Package R-bamdit
# Automatically generated by CRAN2OBS
#
# Spec file for package bamdit
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
#
# Copyright (c) 2026 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
#
# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%global packname bamdit
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 3.6.0
Release: 0
Summary: Bayesian Meta-Analysis of Diagnostic Test Data
Group: Development/Libraries/Other
License: GPL (>= 2)
URL: http://cran.r-project.org/web/packages/%{packname}
Source: bamdit_3.6.0.tar.gz
Requires: R-base
Requires: R-rjags
Requires: R-R2jags
Requires: R-ggplot2
Requires: R-ggExtra
Requires: R-gridExtra
Requires: R-colourpicker
Requires: R-gtable
Requires: R-miniUI
Requires: R-scales
Requires: R-shiny
Requires: R-shinyjs
Requires: R-R6
Requires: R-cli
Requires: R-isoband
Requires: R-lifecycle
Requires: R-rlang
Requires: R-S7
Requires: R-vctrs
Requires: R-withr
Requires: R-abind
Requires: R-coda
Requires: R-R2WinBUGS
Requires: R-stringr
Requires: R-htmltools
Requires: R-htmlwidgets
Requires: R-jsonlite
Requires: R-glue
Requires: R-cpp11
Requires: R-farver
Requires: R-labeling
Requires: R-RColorBrewer
Requires: R-viridisLite
Requires: R-bslib
Requires: R-cachem
Requires: R-commonmark
Requires: R-fastmap
Requires: R-fontawesome
Requires: R-httpuv
Requires: R-later
Requires: R-mime
Requires: R-otel
Requires: R-promises
Requires: R-sourcetools
Requires: R-xtable
Requires: R-digest
Requires: R-magrittr
Requires: R-stringi
Requires: R-base64enc
Requires: R-jquerylib
Requires: R-memoise
Requires: R-sass
Requires: R-knitr
Requires: R-rmarkdown
Requires: R-yaml
Requires: R-Rcpp
Requires: R-evaluate
Requires: R-highr
Requires: R-xfun
Requires: R-tinytex
Requires: R-fs
Requires: R-rappdirs
Requires: jags
Requires: jags-devel
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-rjags
BuildRequires: R-R2jags
BuildRequires: R-ggplot2
BuildRequires: R-ggExtra
BuildRequires: R-gridExtra
BuildRequires: R-colourpicker
BuildRequires: R-gtable
BuildRequires: R-miniUI
BuildRequires: R-scales
BuildRequires: R-shiny
BuildRequires: R-shinyjs
BuildRequires: R-R6
BuildRequires: R-cli
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-rlang
BuildRequires: R-S7
BuildRequires: R-vctrs
BuildRequires: R-withr
BuildRequires: R-abind
BuildRequires: R-coda
BuildRequires: R-R2WinBUGS
BuildRequires: R-stringr
BuildRequires: R-htmltools
BuildRequires: R-htmlwidgets
BuildRequires: R-jsonlite
BuildRequires: R-glue
BuildRequires: R-cpp11-devel
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
BuildRequires: R-bslib
BuildRequires: R-cachem
BuildRequires: R-commonmark
BuildRequires: R-fastmap
BuildRequires: R-fontawesome
BuildRequires: R-httpuv
BuildRequires: R-later
BuildRequires: R-mime
BuildRequires: R-otel
BuildRequires: R-promises
BuildRequires: R-sourcetools-devel
BuildRequires: R-xtable
BuildRequires: R-digest
BuildRequires: R-magrittr
BuildRequires: R-stringi
BuildRequires: R-base64enc
BuildRequires: R-jquerylib
BuildRequires: R-memoise
BuildRequires: R-sass
BuildRequires: R-knitr
BuildRequires: R-rmarkdown
BuildRequires: R-yaml
BuildRequires: R-Rcpp-devel
BuildRequires: R-evaluate
BuildRequires: R-highr
BuildRequires: R-xfun
BuildRequires: R-tinytex
BuildRequires: R-fs
BuildRequires: R-rappdirs
BuildRequires: jags
BuildRequires: jags-devel
%description
Provides a new class of Bayesian meta-analysis models that incorporates
a model for internal and external validity bias. In this way, it is
possible to combine studies of diverse quality and different types. For
example, we can combine the results of randomized control trials (RCTs)
with the results of observational studies (OS).
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog