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R-bikm1
R-bikm1.spec
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File R-bikm1.spec of Package R-bikm1
# Automatically generated by CRAN2OBS # # Spec file for package bikm1 # This file is auto-generated using information in the package source, # esp. Description and Summary. Improvements in that area should be # discussed with upstream. # # Copyright (c) 2023 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # # Please submit bugfixes or comments via http://bugs.opensuse.org/ # %global packname bikm1 %global rlibdir %{_libdir}/R/library Name: R-%{packname} Version: 1.1.0 Release: 0 Summary: Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets Group: Development/Libraries/Other License: GPL-2 URL: http://cran.r-project.org/web/packages/%{packname} Source: bikm1_1.1.0.tar.gz Requires: R-base Requires: R-gtools Requires: R-ade4 Requires: R-pracma Requires: R-ggplot2 Requires: R-reshape2 Requires: R-lpSolve Requires: R-pixmap Requires: R-sp Requires: R-Rcpp Requires: R-RcppArmadillo Requires: R-cli Requires: R-glue Requires: R-gtable Requires: R-isoband Requires: R-lifecycle Requires: R-rlang Requires: R-scales Requires: R-tibble Requires: R-vctrs Requires: R-withr Requires: R-plyr Requires: R-stringr Requires: R-farver Requires: R-labeling Requires: R-munsell Requires: R-R6 Requires: R-RColorBrewer Requires: R-viridisLite Requires: R-magrittr Requires: R-stringi Requires: R-fansi Requires: R-pillar Requires: R-pkgconfig Requires: R-colorspace Requires: R-utf8 # %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} # # Three others commonly needed # BuildRequires: tex(ae.sty) # BuildRequires: tex(fancyvrb.sty) # BuildRequires: tex(inconsolata.sty) # BuildRequires: tex(natbib.sty) # %else # BuildRequires: texlive # %endif # BuildRequires: texinfo BuildRequires: fdupes BuildRequires: R-base BuildRequires: R-gtools BuildRequires: R-ade4 BuildRequires: R-pracma BuildRequires: R-ggplot2 BuildRequires: R-reshape2 BuildRequires: R-lpSolve BuildRequires: R-pixmap BuildRequires: R-sp BuildRequires: R-Rcpp-devel BuildRequires: R-RcppArmadillo-devel BuildRequires: R-cli BuildRequires: R-glue BuildRequires: R-gtable BuildRequires: R-isoband BuildRequires: R-lifecycle BuildRequires: R-rlang BuildRequires: R-scales BuildRequires: R-tibble BuildRequires: R-vctrs BuildRequires: R-withr BuildRequires: R-plyr BuildRequires: R-stringr BuildRequires: R-farver BuildRequires: R-labeling BuildRequires: R-munsell BuildRequires: R-R6 BuildRequires: R-RColorBrewer BuildRequires: R-viridisLite BuildRequires: R-magrittr BuildRequires: R-stringi BuildRequires: R-fansi BuildRequires: R-pillar BuildRequires: R-pkgconfig BuildRequires: R-colorspace BuildRequires: R-utf8 %description Co-clustering of the rows and columns of a contingency or binary matrix, or double binary matrices and model selection for the number of row and column clusters. Three models are considered: the Poisson latent block model for contingency matrix, the binary latent block model for binary matrix and a new model we develop: the multiple latent block model for double binary matrices. A new procedure named bikm1 is implemented to investigate more efficiently the grid of numbers of clusters. Then, the studied model selection criteria are the integrated completed likelihood (ICL) and the Bayesian integrated likelihood (BIC). Finally, the co-clustering adjusted Rand index (CARI) to measure agreement between co-clustering partitions is implemented. Robert Valerie, Vasseur Yann, Brault Vincent (2021) <doi:10.1007/s00357-020-09379-w>. %prep %setup -q -c -n %{packname} # the next line is needed, because we build without --clean in between two packages rm -rf ~/.R %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css %fdupes -s %{buildroot}%{rlibdir} #%%check #%%{_bindir}/R CMD check %%{packname} %files %dir %{rlibdir}/%{packname} %doc %{rlibdir}/%{packname}/DESCRIPTION %{rlibdir}/%{packname}/INDEX %{rlibdir}/%{packname}/Meta %{rlibdir}/%{packname}/NAMESPACE %doc %{rlibdir}/%{packname}/NEWS.md %{rlibdir}/%{packname}/R %doc %{rlibdir}/%{packname}/help %doc %{rlibdir}/%{packname}/html %changelog
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