File R-clustTMB.spec of Package R-clustTMB

# Automatically generated by CRAN2OBS
# 
# Spec file for package clustTMB 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2026 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  clustTMB 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.1.0 
Release:        0 
Summary:        Spatio-Temporal Finite Mixture Model using 'TMB' 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         clustTMB_0.1.0.tar.gz 
Requires:       R-base 
Requires:	R-clustMixType
Requires:	R-fmesher
Requires:	R-lme4
Requires:	R-mclust
Requires:	R-reformulas
Requires:	R-MoEClust
Requires:	R-sf
Requires:	R-TMB
Requires:	R-RcppEigen
Requires:	R-RColorBrewer
Requires:	R-tibble
Requires:	R-combinat
Requires:	R-dplyr
Requires:	R-rlang
Requires:	R-lifecycle
Requires:	R-Rcpp
Requires:	R-splancs
Requires:	R-withr
Requires:	R-minqa
Requires:	R-nloptr
Requires:	R-Rdpack
Requires:	R-matrixStats
Requires:	R-mvnfast
Requires:	R-vcd
Requires:	R-classInt
Requires:	R-DBI
Requires:	R-magrittr
Requires:	R-s2
Requires:	R-units
Requires:	R-e1071
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-pillar
Requires:	R-R6
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-RcppArmadillo
Requires:	R-BH
Requires:	R-rbibutils
Requires:	R-wk
Requires:	R-sp
Requires:	R-pkgconfig
Requires:	R-colorspace
Requires:	R-lmtest
Requires:	R-proxy
Requires:	R-zoo
Requires:	R-utf8
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-clustMixType
BuildRequires: 	R-fmesher
BuildRequires: 	R-lme4
BuildRequires: 	R-mclust
BuildRequires: 	R-reformulas
BuildRequires: 	R-MoEClust
BuildRequires: 	R-sf
BuildRequires: 	R-TMB-devel
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-tibble
BuildRequires: 	R-combinat
BuildRequires: 	R-dplyr
BuildRequires: 	R-rlang
BuildRequires: 	R-lifecycle
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-splancs
BuildRequires: 	R-withr
BuildRequires: 	R-minqa
BuildRequires: 	R-nloptr
BuildRequires: 	R-Rdpack
BuildRequires: 	R-matrixStats
BuildRequires: 	R-mvnfast
BuildRequires: 	R-vcd
BuildRequires: 	R-classInt
BuildRequires: 	R-DBI
BuildRequires: 	R-magrittr
BuildRequires: 	R-s2
BuildRequires: 	R-units
BuildRequires: 	R-e1071
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-BH-devel
BuildRequires: 	R-rbibutils
BuildRequires: 	R-wk
BuildRequires: 	R-sp
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-colorspace
BuildRequires: 	R-lmtest
BuildRequires: 	R-proxy
BuildRequires: 	R-zoo
BuildRequires: 	R-utf8
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-bookdown
Suggests:	R-covr
Suggests:	R-cowplot
Suggests:	R-dplyr
Suggests:	R-FMsmsnReg
Suggests:	R-GGally
Suggests:	R-ggplot2
Suggests:	R-ggspatial
Suggests:	R-giscoR
Suggests:	R-inlabru
Suggests:	R-kableExtra
Suggests:	R-knitr
Suggests:	R-magrittr
Suggests:	R-MixSim
Suggests:	R-mvnfast
Suggests:	R-mvtnorm
Suggests:	R-palmerpenguins
Suggests:	R-rmarkdown
Suggests:	R-sdmTMB
Suggests:	R-sp
Suggests:	R-spData
Suggests:	R-splancs
Suggests:	R-testthat
Suggests:	R-tidyr
Suggests:	R-tweedie
Suggests:	R-wesanderson
%description 
Fits a spatio-temporal finite mixture model using 'TMB'. Covariate, 
spatial and temporal random effects can be incorporated into the gating 
formula using multinomial logistic regression, the expert formula using 
a generalized linear mixed model framework, or both. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Matrix-version
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/TMB-version
%{rlibdir}/%{packname}/WORDLIST
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
 
%changelog