File R-dispRity.spec of Package R-dispRity

# Automatically generated by CRAN2OBS
# 
# Spec file for package dispRity 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
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# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  dispRity 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.9 
Release:        0 
Summary:        Measuring Disparity 
Group:          Development/Libraries/Other 
License:        GPL-3 | file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         dispRity_1.9.tar.gz 
Requires:       R-base 
Requires:	R-ape
Requires:	R-ade4
Requires:	R-castor
Requires:	R-Claddis
Requires:	R-ellipse
Requires:	R-geometry
Requires:	R-GET
Requires:	R-mnormt
Requires:	R-phangorn
Requires:	R-phyclust
Requires:	R-phylolm
Requires:	R-vegan
Requires:	R-scales
Requires:	R-zoo
Requires:	R-pixmap
Requires:	R-sp
Requires:	R-Rcpp
Requires:	R-RcppArmadillo
Requires:	R-digest
Requires:	R-naturalsort
Requires:	R-RSpectra
Requires:	R-jsonlite
Requires:	R-phytools
Requires:	R-strap
Requires:	R-clipr
Requires:	R-geoscale
Requires:	R-multicool
Requires:	R-partitions
Requires:	R-magic
Requires:	R-lpSolve
Requires:	R-linprog
Requires:	R-RcppProgress
Requires:	R-ggplot2
Requires:	R-gridExtra
Requires:	R-viridisLite
Requires:	R-fastmatch
Requires:	R-generics
Requires:	R-igraph
Requires:	R-quadprog
Requires:	R-future.apply
Requires:	R-cli
Requires:	R-farver
Requires:	R-glue
Requires:	R-labeling
Requires:	R-lifecycle
Requires:	R-R6
Requires:	R-RColorBrewer
Requires:	R-rlang
Requires:	R-permute
Requires:	R-future
Requires:	R-globals
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-S7
Requires:	R-vctrs
Requires:	R-withr
Requires:	R-magrittr
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-abind
Requires:	R-gmp
Requires:	R-polynom
Requires:	R-sets
Requires:	R-Rdpack
Requires:	R-maps
Requires:	R-clusterGeneration
Requires:	R-coda
Requires:	R-combinat
Requires:	R-DEoptim
Requires:	R-doParallel
Requires:	R-expm
Requires:	R-foreach
Requires:	R-numDeriv
Requires:	R-optimParallel
Requires:	R-scatterplot3d
Requires:	R-RcppEigen
Requires:	R-pbapply
Requires:	R-iterators
Requires:	R-listenv
Requires:	R-parallelly
Requires:	R-rbibutils
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
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BuildRequires:  fdupes 
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BuildRequires: 	R-ape
BuildRequires: 	R-ade4
BuildRequires: 	R-castor
BuildRequires: 	R-Claddis
BuildRequires: 	R-ellipse
BuildRequires: 	R-geometry
BuildRequires: 	R-GET
BuildRequires: 	R-mnormt
BuildRequires: 	R-phangorn
BuildRequires: 	R-phyclust
BuildRequires: 	R-phylolm
BuildRequires: 	R-vegan
BuildRequires: 	R-scales
BuildRequires: 	R-zoo
BuildRequires: 	R-pixmap
BuildRequires: 	R-sp
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-digest
BuildRequires: 	R-naturalsort
BuildRequires: 	R-RSpectra-devel
BuildRequires: 	R-jsonlite
BuildRequires: 	R-phytools
BuildRequires: 	R-strap
BuildRequires: 	R-clipr
BuildRequires: 	R-geoscale
BuildRequires: 	R-multicool
BuildRequires: 	R-partitions
BuildRequires: 	R-magic
BuildRequires: 	R-lpSolve
BuildRequires: 	R-linprog
BuildRequires: 	R-RcppProgress
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BuildRequires: 	R-iterators
BuildRequires: 	R-listenv
BuildRequires: 	R-parallelly
BuildRequires: 	R-rbibutils
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-MCMCglmm
Suggests:	R-geoscale
Suggests:	R-testthat
Suggests:	R-knitr
%description 
A modular package for measuring disparity (multidimensional space 
occupancy). Disparity can be calculated from any matrix defining a 
multidimensional space. The package provides a set of implemented 
metrics to measure properties of the space and allows users to provide 
and test their own metrics. The package also provides functions for 
looking at disparity in a serial way (e.g. disparity through time) or 
per groups as well as visualising the results. Finally, this package 
provides several statistical tests for disparity analysis. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/References.bib
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
%{rlibdir}/%{packname}/packages.bib
%{rlibdir}/%{packname}/vignettes
 
%changelog