File R-epizootic.spec of Package R-epizootic

# Automatically generated by CRAN2OBS
# 
# Spec file for package epizootic 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  epizootic 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.0 
Release:        0 
Summary:        Spatially Explicit Population Models of Disease Transmission in Wildlife 
Group:          Development/Libraries/Other 
License:        GPL (>= 3) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         epizootic_1.0.0.tar.gz 
Requires:       R-base 
Requires:	R-purrr
Requires:	R-dplyr
Requires:	R-tibble
Requires:	R-R6
Requires:	R-cli
Requires:	R-raster
Requires:	R-qs
Requires:	R-poems
Requires:	R-doParallel
Requires:	R-foreach
Requires:	R-Rcpp
Requires:	R-RcppArmadillo
Requires:	R-iterators
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-rlang
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-abc
Requires:	R-fossil
Requires:	R-lhs
Requires:	R-metRology
Requires:	R-trend
Requires:	R-truncnorm
Requires:	R-gdistance
Requires:	R-RApiSerialize
Requires:	R-stringfish
Requires:	R-BH
Requires:	R-sp
Requires:	R-terra
Requires:	R-pkgconfig
Requires:	R-abc.data
Requires:	R-quantreg
Requires:	R-locfit
Requires:	R-maps
Requires:	R-shapefiles
Requires:	R-igraph
Requires:	R-numDeriv
Requires:	R-robustbase
Requires:	R-utf8
Requires:	R-RcppParallel
Requires:	R-withr
Requires:	R-extraDistr
Requires:	R-cpp11
Requires:	R-SparseM
Requires:	R-MatrixModels
Requires:	R-DEoptimR
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-purrr
BuildRequires: 	R-dplyr
BuildRequires: 	R-tibble
BuildRequires: 	R-R6
BuildRequires: 	R-cli
BuildRequires: 	R-raster
BuildRequires: 	R-qs
BuildRequires: 	R-poems
BuildRequires: 	R-doParallel
BuildRequires: 	R-foreach
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-iterators
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-rlang
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-abc
BuildRequires: 	R-fossil
BuildRequires: 	R-lhs
BuildRequires: 	R-metRology
BuildRequires: 	R-trend
BuildRequires: 	R-truncnorm
BuildRequires: 	R-gdistance
BuildRequires: 	R-RApiSerialize
BuildRequires: 	R-stringfish
BuildRequires: 	R-BH-devel
BuildRequires: 	R-sp
BuildRequires: 	R-terra
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-abc.data
BuildRequires: 	R-quantreg
BuildRequires: 	R-locfit
BuildRequires: 	R-maps
BuildRequires: 	R-shapefiles
BuildRequires: 	R-igraph
BuildRequires: 	R-numDeriv
BuildRequires: 	R-robustbase
BuildRequires: 	R-utf8
BuildRequires: 	R-RcppParallel-devel
BuildRequires: 	R-withr
BuildRequires: 	R-extraDistr
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-SparseM
BuildRequires: 	R-MatrixModels
BuildRequires: 	R-DEoptimR
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-testthat
Suggests:	R-geosphere
Suggests:	R-knitr
Suggests:	R-rmarkdown
%description 
This extension of the pattern-oriented modeling framework of the 
'poems' package provides a collection of modules and functions 
customized for modeling disease transmission on a population scale in a 
spatiotemporally explicit manner. This includes seasonal time steps, 
dispersal functions that track disease state of dispersers, results 
objects that store disease states, and a population simulator that 
includes disease dynamics. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
 
%changelog