File R-ggpicrust2.spec of Package R-ggpicrust2

# Automatically generated by CRAN2OBS
# 
# Spec file for package ggpicrust2 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  ggpicrust2 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        2.5.2 
Release:        0 
Summary:        Make 'PICRUSt2' Output Analysis and Visualization Easier 
Group:          Development/Libraries/Other 
License:        MIT + file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         ggpicrust2_2.5.2.tar.gz 
Requires:       R-base 
Requires:	R-aplot
Requires:	R-dplyr
Requires:	R-ggplot2
Requires:	R-ggh4x
Requires:	R-readr
Requires:	R-tibble
Requires:	R-tidyr
Requires:	R-ggprism
Requires:	R-patchwork
Requires:	R-ggplotify
Requires:	R-magrittr
Requires:	R-progress
Requires:	R-tidygraph
Requires:	R-ggraph
Requires:	R-ggfun
Requires:	R-yulab.utils
Requires:	R-pillar
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-gtable
Requires:	R-scales
Requires:	R-S7
Requires:	R-isoband
Requires:	R-withr
Requires:	R-gridGraphics
Requires:	R-digest
Requires:	R-ggforce
Requires:	R-igraph
Requires:	R-ggrepel
Requires:	R-viridis
Requires:	R-graphlayouts
Requires:	R-memoise
Requires:	R-cpp11
Requires:	R-farver
Requires:	R-crayon
Requires:	R-hms
Requires:	R-prettyunits
Requires:	R-clipr
Requires:	R-vroom
Requires:	R-tzdb
Requires:	R-pkgconfig
Requires:	R-purrr
Requires:	R-stringr
Requires:	R-tweenr
Requires:	R-polyclip
Requires:	R-systemfonts
Requires:	R-Rcpp
Requires:	R-RcppArmadillo
Requires:	R-cachem
Requires:	R-utf8
Requires:	R-labeling
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-stringi
Requires:	R-gridExtra
Requires:	R-bit64
Requires:	R-fs
Requires:	R-rappdirs
Requires:	R-bit
Requires:	R-fastmap
Requires:	R-base64enc
Requires:	R-jsonlite
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-aplot
BuildRequires: 	R-dplyr
BuildRequires: 	R-ggplot2
BuildRequires: 	R-ggh4x
BuildRequires: 	R-readr
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyr
BuildRequires: 	R-ggprism
BuildRequires: 	R-patchwork
BuildRequires: 	R-ggplotify
BuildRequires: 	R-magrittr
BuildRequires: 	R-progress
BuildRequires: 	R-tidygraph
BuildRequires: 	R-ggraph
BuildRequires: 	R-ggfun
BuildRequires: 	R-yulab.utils
BuildRequires: 	R-pillar
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-gtable
BuildRequires: 	R-scales
BuildRequires: 	R-S7
BuildRequires: 	R-isoband
BuildRequires: 	R-withr
BuildRequires: 	R-gridGraphics
BuildRequires: 	R-digest
BuildRequires: 	R-ggforce
BuildRequires: 	R-igraph
BuildRequires: 	R-ggrepel
BuildRequires: 	R-viridis
BuildRequires: 	R-graphlayouts
BuildRequires: 	R-memoise
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-farver
BuildRequires: 	R-crayon
BuildRequires: 	R-hms
BuildRequires: 	R-prettyunits
BuildRequires: 	R-clipr
BuildRequires: 	R-vroom
BuildRequires: 	R-tzdb
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-purrr
BuildRequires: 	R-stringr
BuildRequires: 	R-tweenr
BuildRequires: 	R-polyclip
BuildRequires: 	R-systemfonts
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppArmadillo-devel
BuildRequires: 	R-cachem
BuildRequires: 	R-utf8
BuildRequires: 	R-labeling
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-stringi
BuildRequires: 	R-gridExtra
BuildRequires: 	R-bit64
BuildRequires: 	R-fs
BuildRequires: 	R-rappdirs
BuildRequires: 	R-bit
BuildRequires: 	R-fastmap
BuildRequires: 	R-base64enc
BuildRequires: 	R-jsonlite
 
Suggests:	R-Biobase
Suggests:	R-KEGGREST
Suggests:	R-ComplexHeatmap
Suggests:	R-BiocGenerics
Suggests:	R-testthat
Suggests:	R-ALDEx2
Suggests:	R-DESeq2
Suggests:	R-edgeR
Suggests:	R-GGally
Suggests:	R-ggdendro
Suggests:	R-limma
Suggests:	R-Maaslin2
Suggests:	R-metagenomeSeq
Suggests:	R-MicrobiomeStat
Suggests:	R-SummarizedExperiment
Suggests:	R-circlize
Suggests:	R-lefser
Suggests:	R-fgsea
Suggests:	R-clusterProfiler
Suggests:	R-enrichplot
Suggests:	R-DOSE
Suggests:	R-ggVennDiagram
Suggests:	R-UpSetR
Suggests:	R-igraph
%description 
Provides a convenient way to analyze and visualize 'PICRUSt2' output 
with pre-defined plots and functions. Allows for generating statistical 
plots about microbiome functional predictions and offers customization 
options. Features a one-click option for creating publication-level 
plots, saving time and effort in producing professional-grade figures. 
Streamlines the 'PICRUSt2' analysis and visualization process. For more 
details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/PICRUST_COMPATIBILITY.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/citation
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/extdata
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog