File R-glyrepr.spec of Package R-glyrepr

# Automatically generated by CRAN2OBS
# 
# Spec file for package glyrepr 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  glyrepr 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        0.7.5 
Release:        0 
Summary:        Representation for Glycan Compositions and Structures 
Group:          Development/Libraries/Other 
License:        MIT + file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         glyrepr_0.7.5.tar.gz 
Requires:       R-base 
Requires:	R-checkmate
Requires:	R-cli
Requires:	R-dplyr
Requires:	R-furrr
Requires:	R-future
Requires:	R-glue
Requires:	R-igraph
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-purrr
Requires:	R-rlang
Requires:	R-rstackdeque
Requires:	R-stringr
Requires:	R-vctrs
Requires:	R-backports
Requires:	R-generics
Requires:	R-lifecycle
Requires:	R-R6
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-globals
Requires:	R-digest
Requires:	R-listenv
Requires:	R-parallelly
Requires:	R-pkgconfig
Requires:	R-cpp11
Requires:	R-utf8
Requires:	R-stringi
Requires:	R-withr
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-checkmate
BuildRequires: 	R-cli
BuildRequires: 	R-dplyr
BuildRequires: 	R-furrr
BuildRequires: 	R-future
BuildRequires: 	R-glue
BuildRequires: 	R-igraph
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-purrr
BuildRequires: 	R-rlang
BuildRequires: 	R-rstackdeque
BuildRequires: 	R-stringr
BuildRequires: 	R-vctrs
BuildRequires: 	R-backports
BuildRequires: 	R-generics
BuildRequires: 	R-lifecycle
BuildRequires: 	R-R6
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyselect
BuildRequires: 	R-globals
BuildRequires: 	R-digest
BuildRequires: 	R-listenv
BuildRequires: 	R-parallelly
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-utf8
BuildRequires: 	R-stringi
BuildRequires: 	R-withr
 
Suggests:	R-testthat
Suggests:	R-patrick
Suggests:	R-tibble
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-tictoc
Suggests:	R-lobstr
%description 
Computational representations of glycan compositions and structures, 
including details such as linkages, anomers, and substituents. Supports 
varying levels of monosaccharide specificity (e.g., "Hex" or "Gal") and 
ambiguous linkages. Provides robust parsing and generation of 
IUPAC-condensed structure strings. Optimized for vectorized operations 
on glycan structures, with efficient handling of duplications. As the 
cornerstone of the glycoverse ecosystem, this package delivers the 
foundational data structures that power glycomics and glycoproteomics 
analysis workflows. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog