File R-homologene.spec of Package R-homologene

# Automatically generated by CRAN2OBS
# 
# Spec file for package homologene 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  homologene 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.4.68.19.3.27 
Release:        0 
Summary:        Quick Access to Homologene and Gene Annotation Updates 
Group:          Development/Libraries/Other 
License:        MIT + file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         homologene_1.4.68.19.3.27.tar.gz 
Requires:       R-base 
Requires:	R-dplyr
Requires:	R-magrittr
Requires:	R-purrr
Requires:	R-readr
Requires:	R-R.utils
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tibble
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-R.oo
Requires:	R-R.methodsS3
Requires:	R-clipr
Requires:	R-crayon
Requires:	R-hms
Requires:	R-vroom
Requires:	R-cpp11
Requires:	R-tzdb
Requires:	R-pkgconfig
Requires:	R-utf8
Requires:	R-withr
Requires:	R-bit64
Requires:	R-progress
Requires:	R-bit
Requires:	R-prettyunits
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-dplyr
BuildRequires: 	R-magrittr
BuildRequires: 	R-purrr
BuildRequires: 	R-readr
BuildRequires: 	R-R.utils
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-R.oo
BuildRequires: 	R-R.methodsS3
BuildRequires: 	R-clipr
BuildRequires: 	R-crayon
BuildRequires: 	R-hms
BuildRequires: 	R-vroom
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-tzdb
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-utf8
BuildRequires: 	R-withr
BuildRequires: 	R-bit64
BuildRequires: 	R-progress
BuildRequires: 	R-bit
BuildRequires: 	R-prettyunits
 
Suggests:	R-testthat
%description 
A wrapper for the homologene database by the National Center for 
Biotechnology Information ('NCBI'). It allows searching for gene 
homologs across species. Data in this package can be found at 
<ftp://ftp.ncbi.nih.gov/pub/HomoloGene/build68/>. The package also 
includes an updated version of the homologene database where gene 
identifiers and symbols are replaced with their latest (at the time of 
submission) version and functions to fetch latest annotation data to 
keep updated. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
 
%changelog