File R-mmeta.spec of Package R-mmeta
# Automatically generated by CRAN2OBS
#
# Spec file for package mmeta
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
#
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany.
#
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# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
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# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%global packname mmeta
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 3.0.2
Release: 0
Summary: Multivariate Meta-Analysis
Group: Development/Libraries/Other
License: GPL (>= 2)
URL: http://cran.r-project.org/web/packages/%{packname}
Source: mmeta_3.0.2.tar.gz
Requires: R-base
Requires: R-aod
Requires: R-ggplot2
Requires: R-cli
Requires: R-gtable
Requires: R-isoband
Requires: R-lifecycle
Requires: R-rlang
Requires: R-S7
Requires: R-scales
Requires: R-vctrs
Requires: R-withr
Requires: R-glue
Requires: R-farver
Requires: R-labeling
Requires: R-R6
Requires: R-RColorBrewer
Requires: R-viridisLite
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-aod
BuildRequires: R-ggplot2
BuildRequires: R-cli
BuildRequires: R-gtable
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-rlang
BuildRequires: R-S7
BuildRequires: R-scales
BuildRequires: R-vctrs
BuildRequires: R-withr
BuildRequires: R-glue
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-R6
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
BuildRequires: gcc gcc-c++ gcc-fortran
Suggests: R-testthat
%description
Multiple 2 by 2 tables often arise in meta-analysis which combines
statistical evidence from multiple studies. Two risks within the same
study are possibly correlated because they share some common factors
such as environment and population structure. This package implements a
set of novel Bayesian approaches for multivariate meta analysis when
the risks within the same study are independent or correlated. The
exact posterior inference of odds ratio, relative risk, and risk
difference given either a single 2 by 2 table or multiple 2 by 2 tables
is provided. Luo, Chen, Su, Chu, (2014) <doi:10.18637/jss.v056.i11>,
Chen, Luo, (2011) <doi:10.1002/sim.4248>, Chen, Chu, Luo, Nie, Chen,
(2015) <doi:10.1177/0962280211430889>, Chen, Luo, Chu, Su, Nie, (2014)
<doi:10.1080/03610926.2012.700379>, Chen, Luo, Chu, Wei, (2013)
<doi:10.1080/19466315.2013.791483>.
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/WORDLIST
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
%changelog
