File R-morse.spec of Package R-morse

# Automatically generated by CRAN2OBS
# 
# Spec file for package morse 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  morse 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        3.3.4 
Release:        0 
Summary:        Modelling Reproduction and Survival Data in Ecotoxicology 
Group:          Development/Libraries/Other 
License:        MIT + file LICENSE 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         morse_3.3.4.tar.gz 
Requires:       R-base 
Requires:	R-coda
Requires:	R-deSolve
Requires:	R-dplyr
Requires:	R-epitools
Requires:	R-ggplot2
Requires:	R-gridExtra
Requires:	R-magrittr
Requires:	R-reshape2
Requires:	R-rjags
Requires:	R-tibble
Requires:	R-tidyr
Requires:	R-zoo
Requires:	R-cli
Requires:	R-generics
Requires:	R-glue
Requires:	R-lifecycle
Requires:	R-pillar
Requires:	R-R6
Requires:	R-rlang
Requires:	R-tidyselect
Requires:	R-vctrs
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-S7
Requires:	R-scales
Requires:	R-withr
Requires:	R-plyr
Requires:	R-Rcpp
Requires:	R-stringr
Requires:	R-pkgconfig
Requires:	R-purrr
Requires:	R-cpp11
Requires:	R-utf8
Requires:	R-farver
Requires:	R-labeling
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-stringi
Requires:	jags
Requires:	jags-devel
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-coda
BuildRequires: 	R-deSolve-devel
BuildRequires: 	R-dplyr
BuildRequires: 	R-epitools
BuildRequires: 	R-ggplot2
BuildRequires: 	R-gridExtra
BuildRequires: 	R-magrittr
BuildRequires: 	R-reshape2
BuildRequires: 	R-rjags
BuildRequires: 	R-tibble
BuildRequires: 	R-tidyr
BuildRequires: 	R-zoo
BuildRequires: 	R-cli
BuildRequires: 	R-generics
BuildRequires: 	R-glue
BuildRequires: 	R-lifecycle
BuildRequires: 	R-pillar
BuildRequires: 	R-R6
BuildRequires: 	R-rlang
BuildRequires: 	R-tidyselect
BuildRequires: 	R-vctrs
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-S7
BuildRequires: 	R-scales
BuildRequires: 	R-withr
BuildRequires: 	R-plyr
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-stringr
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-purrr
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-utf8
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-stringi
BuildRequires: 	jags
BuildRequires: 	jags-devel
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-knitr
Suggests:	R-rmarkdown
Suggests:	R-testthat
%description 
Advanced methods for a valuable quantitative environmental risk 
assessment using Bayesian inference of survival and reproduction Data. 
Among others, it facilitates Bayesian inference of the general unified 
threshold model of survival (GUTS). See our companion paper Baudrot and 
Charles (2021) <doi:10.21105/joss.03200>, as well as complementary 
details in Baudrot et al. (2018) <doi:10.1021/acs.est.7b05464> and 
Delignette-Muller et al. (2017) <doi:10.1021/acs.est.6b05326>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
 
%changelog