File R-mvMORPH.spec of Package R-mvMORPH

# Automatically generated by CRAN2OBS
# 
# Spec file for package mvMORPH 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2025 SUSE LINUX GmbH, Nuernberg, Germany. 
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# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  mvMORPH 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.2.1 
Release:        0 
Summary:        Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data 
Group:          Development/Libraries/Other 
License:        GPL (>= 2.0) 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         mvMORPH_1.2.1.tar.gz 
Requires:       R-base 
Requires:	R-phytools
Requires:	R-ape
Requires:	R-corpcor
Requires:	R-subplex
Requires:	R-spam
Requires:	R-glassoFast
Requires:	R-pbmcapply
Requires:	R-Rcpp
Requires:	R-digest
Requires:	R-maps
Requires:	R-clusterGeneration
Requires:	R-coda
Requires:	R-combinat
Requires:	R-DEoptim
Requires:	R-doParallel
Requires:	R-expm
Requires:	R-foreach
Requires:	R-mnormt
Requires:	R-numDeriv
Requires:	R-optimParallel
Requires:	R-phangorn
Requires:	R-scatterplot3d
Requires:	R-dotCall64
Requires:	R-iterators
Requires:	R-fastmatch
Requires:	R-generics
Requires:	R-igraph
Requires:	R-quadprog
Requires:	R-cli
Requires:	R-lifecycle
Requires:	R-magrittr
Requires:	R-pkgconfig
Requires:	R-rlang
Requires:	R-vctrs
Requires:	R-cpp11
Requires:	R-glue
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-phytools
BuildRequires: 	R-ape
BuildRequires: 	R-corpcor
BuildRequires: 	R-subplex
BuildRequires: 	R-spam
BuildRequires: 	R-glassoFast
BuildRequires: 	R-pbmcapply
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-digest
BuildRequires: 	R-maps
BuildRequires: 	R-clusterGeneration
BuildRequires: 	R-coda
BuildRequires: 	R-combinat
BuildRequires: 	R-DEoptim
BuildRequires: 	R-doParallel
BuildRequires: 	R-expm
BuildRequires: 	R-foreach
BuildRequires: 	R-mnormt
BuildRequires: 	R-numDeriv
BuildRequires: 	R-optimParallel
BuildRequires: 	R-phangorn
BuildRequires: 	R-scatterplot3d
BuildRequires: 	R-dotCall64
BuildRequires: 	R-iterators
BuildRequires: 	R-fastmatch
BuildRequires: 	R-generics
BuildRequires: 	R-igraph
BuildRequires: 	R-quadprog
BuildRequires: 	R-cli
BuildRequires: 	R-lifecycle
BuildRequires: 	R-magrittr
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-rlang
BuildRequires: 	R-vctrs
BuildRequires: 	R-cpp11-devel
BuildRequires: 	R-glue
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-knitr
Suggests:	R-car
%description 
Fits multivariate (Brownian Motion, Early Burst, ACDC, 
Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on 
trees and time series. 'mvMORPH' also proposes high-dimensional 
multivariate comparative tools (linear models using Generalized Least 
Squares and multivariate tests) based on penalized likelihood.  See 
Clavel et al. (2015) <DOI:10.1111/2041-210X.12420>, Clavel et al. 
(2019) <DOI:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) 
<DOI:10.1093/sysbio/syaa010>. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/libs
 
%changelog