File R-packMBPLSDA.spec of Package R-packMBPLSDA
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# Spec file for package packMBPLSDA
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
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%global packname packMBPLSDA
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 0.9.0
Release: 0
Summary: Multi-Block Partial Least Squares Discriminant Analysis
Group: Development/Libraries/Other
License: GPL (>= 2.0)
URL: http://cran.r-project.org/web/packages/%{packname}
Source: packMBPLSDA_0.9.0.tar.gz
Requires: R-base
Requires: R-ade4
Requires: R-pROC
Requires: R-doParallel
Requires: R-foreach
Requires: R-FactoMineR
Requires: R-pixmap
Requires: R-sp
Requires: R-Rcpp
Requires: R-RcppArmadillo
Requires: R-iterators
Requires: R-car
Requires: R-DT
Requires: R-ellipse
Requires: R-emmeans
Requires: R-flashClust
Requires: R-leaps
Requires: R-multcompView
Requires: R-scatterplot3d
Requires: R-ggplot2
Requires: R-ggrepel
Requires: R-plyr
Requires: R-carData
Requires: R-abind
Requires: R-Formula
Requires: R-pbkrtest
Requires: R-quantreg
Requires: R-lme4
Requires: R-scales
Requires: R-htmltools
Requires: R-htmlwidgets
Requires: R-httpuv
Requires: R-jsonlite
Requires: R-magrittr
Requires: R-crosstalk
Requires: R-jquerylib
Requires: R-promises
Requires: R-estimability
Requires: R-mvtnorm
Requires: R-numDeriv
Requires: R-cli
Requires: R-glue
Requires: R-gtable
Requires: R-isoband
Requires: R-lifecycle
Requires: R-rlang
Requires: R-tibble
Requires: R-vctrs
Requires: R-withr
Requires: R-lazyeval
Requires: R-R6
Requires: R-base64enc
Requires: R-digest
Requires: R-fastmap
Requires: R-knitr
Requires: R-rmarkdown
Requires: R-yaml
Requires: R-later
Requires: R-minqa
Requires: R-nloptr
Requires: R-reformulas
Requires: R-RcppEigen
Requires: R-broom
Requires: R-dplyr
Requires: R-doBy
Requires: R-SparseM
Requires: R-MatrixModels
Requires: R-farver
Requires: R-labeling
Requires: R-RColorBrewer
Requires: R-viridisLite
Requires: R-pillar
Requires: R-pkgconfig
Requires: R-backports
Requires: R-generics
Requires: R-purrr
Requires: R-stringr
Requires: R-tidyr
Requires: R-cowplot
Requires: R-Deriv
Requires: R-modelr
Requires: R-microbenchmark
Requires: R-tidyselect
Requires: R-evaluate
Requires: R-highr
Requires: R-xfun
Requires: R-utf8
Requires: R-Rdpack
Requires: R-bslib
Requires: R-fontawesome
Requires: R-tinytex
Requires: R-cachem
Requires: R-memoise
Requires: R-mime
Requires: R-sass
Requires: R-rbibutils
Requires: R-stringi
Requires: R-cpp11
Requires: R-fs
Requires: R-rappdirs
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-ade4
BuildRequires: R-pROC
BuildRequires: R-doParallel
BuildRequires: R-foreach
BuildRequires: R-FactoMineR
BuildRequires: R-pixmap
BuildRequires: R-sp
BuildRequires: R-Rcpp-devel
BuildRequires: R-RcppArmadillo-devel
BuildRequires: R-iterators
BuildRequires: R-car
BuildRequires: R-DT
BuildRequires: R-ellipse
BuildRequires: R-emmeans
BuildRequires: R-flashClust
BuildRequires: R-leaps
BuildRequires: R-multcompView
BuildRequires: R-scatterplot3d
BuildRequires: R-ggplot2
BuildRequires: R-ggrepel
BuildRequires: R-plyr
BuildRequires: R-carData
BuildRequires: R-abind
BuildRequires: R-Formula
BuildRequires: R-pbkrtest
BuildRequires: R-quantreg
BuildRequires: R-lme4
BuildRequires: R-scales
BuildRequires: R-htmltools
BuildRequires: R-htmlwidgets
BuildRequires: R-httpuv
BuildRequires: R-jsonlite
BuildRequires: R-magrittr
BuildRequires: R-crosstalk
BuildRequires: R-jquerylib
BuildRequires: R-promises
BuildRequires: R-estimability
BuildRequires: R-mvtnorm
BuildRequires: R-numDeriv
BuildRequires: R-cli
BuildRequires: R-glue
BuildRequires: R-gtable
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-rlang
BuildRequires: R-tibble
BuildRequires: R-vctrs
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BuildRequires: R-lazyeval
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BuildRequires: R-knitr
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BuildRequires: R-later
BuildRequires: R-minqa
BuildRequires: R-nloptr
BuildRequires: R-reformulas
BuildRequires: R-RcppEigen-devel
BuildRequires: R-broom
BuildRequires: R-dplyr
BuildRequires: R-doBy
BuildRequires: R-SparseM
BuildRequires: R-MatrixModels
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
BuildRequires: R-pillar
BuildRequires: R-pkgconfig
BuildRequires: R-backports
BuildRequires: R-generics
BuildRequires: R-purrr
BuildRequires: R-stringr
BuildRequires: R-tidyr
BuildRequires: R-cowplot
BuildRequires: R-Deriv
BuildRequires: R-modelr
BuildRequires: R-microbenchmark
BuildRequires: R-tidyselect
BuildRequires: R-evaluate
BuildRequires: R-highr
BuildRequires: R-xfun
BuildRequires: R-utf8
BuildRequires: R-Rdpack
BuildRequires: R-bslib
BuildRequires: R-fontawesome
BuildRequires: R-tinytex
BuildRequires: R-cachem
BuildRequires: R-memoise
BuildRequires: R-mime
BuildRequires: R-sass
BuildRequires: R-rbibutils
BuildRequires: R-stringi
BuildRequires: R-cpp11-devel
BuildRequires: R-fs
BuildRequires: R-rappdirs
%description
Several functions are provided to implement a MBPLSDA : components
search, optimal model components number search, optimal model validity
test by permutation tests, observed values evaluation of optimal model
parameters and predicted categories, bootstrap values evaluation of
optimal model parameters and predicted cross-validated categories. The
use of this package is described in Brandolini-Bunlon et al (2019.
Multi-block PLS discriminant analysis for the joint analysis of
metabolomic and epidemiological data. Metabolomics, 15(10):134).
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog
