File R-patientProfilesVis.spec of Package R-patientProfilesVis
# Automatically generated by CRAN2OBS
#
# Spec file for package patientProfilesVis
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
#
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%global packname patientProfilesVis
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 2.0.10
Release: 0
Summary: Visualization of Patient Profiles
Group: Development/Libraries/Other
License: MIT + file LICENSE
URL: http://cran.r-project.org/web/packages/%{packname}
Source: patientProfilesVis_2.0.10.tar.gz
Requires: R-base
Requires: R-clinUtils
Requires: R-ggplot2
Requires: R-plyr
Requires: R-cowplot
Requires: R-reshape2
Requires: R-knitr
Requires: R-stringr
Requires: R-gridExtra
Requires: R-scales
Requires: R-crosstalk
Requires: R-data.table
Requires: R-DT
Requires: R-haven
Requires: R-htmlwidgets
Requires: R-viridisLite
Requires: R-gtable
Requires: R-rlang
Requires: R-cli
Requires: R-isoband
Requires: R-lifecycle
Requires: R-S7
Requires: R-vctrs
Requires: R-withr
Requires: R-evaluate
Requires: R-highr
Requires: R-xfun
Requires: R-yaml
Requires: R-Rcpp
Requires: R-farver
Requires: R-glue
Requires: R-labeling
Requires: R-R6
Requires: R-RColorBrewer
Requires: R-magrittr
Requires: R-stringi
Requires: R-htmltools
Requires: R-jsonlite
Requires: R-lazyeval
Requires: R-jquerylib
Requires: R-promises
Requires: R-forcats
Requires: R-hms
Requires: R-readr
Requires: R-tibble
Requires: R-tidyselect
Requires: R-cpp11
Requires: R-rmarkdown
Requires: R-pkgconfig
Requires: R-base64enc
Requires: R-digest
Requires: R-fastmap
Requires: R-later
Requires: R-clipr
Requires: R-crayon
Requires: R-vroom
Requires: R-tzdb
Requires: R-bslib
Requires: R-fontawesome
Requires: R-tinytex
Requires: R-pillar
Requires: R-cachem
Requires: R-memoise
Requires: R-mime
Requires: R-sass
Requires: R-utf8
Requires: R-bit64
Requires: R-progress
Requires: R-bit
Requires: R-prettyunits
Requires: R-fs
Requires: R-rappdirs
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-clinUtils
BuildRequires: R-ggplot2
BuildRequires: R-plyr
BuildRequires: R-cowplot
BuildRequires: R-reshape2
BuildRequires: R-knitr
BuildRequires: R-stringr
BuildRequires: R-gridExtra
BuildRequires: R-scales
BuildRequires: R-crosstalk
BuildRequires: R-data.table
BuildRequires: R-DT
BuildRequires: R-haven
BuildRequires: R-htmlwidgets
BuildRequires: R-viridisLite
BuildRequires: R-gtable
BuildRequires: R-rlang
BuildRequires: R-cli
BuildRequires: R-isoband
BuildRequires: R-lifecycle
BuildRequires: R-S7
BuildRequires: R-vctrs
BuildRequires: R-withr
BuildRequires: R-evaluate
BuildRequires: R-highr
BuildRequires: R-xfun
BuildRequires: R-yaml
BuildRequires: R-Rcpp-devel
BuildRequires: R-farver
BuildRequires: R-glue
BuildRequires: R-labeling
BuildRequires: R-R6
BuildRequires: R-RColorBrewer
BuildRequires: R-magrittr
BuildRequires: R-stringi
BuildRequires: R-htmltools
BuildRequires: R-jsonlite
BuildRequires: R-lazyeval
BuildRequires: R-jquerylib
BuildRequires: R-promises
BuildRequires: R-forcats
BuildRequires: R-hms
BuildRequires: R-readr
BuildRequires: R-tibble
BuildRequires: R-tidyselect
BuildRequires: R-cpp11-devel
BuildRequires: R-rmarkdown
BuildRequires: R-pkgconfig
BuildRequires: R-base64enc
BuildRequires: R-digest
BuildRequires: R-fastmap
BuildRequires: R-later
BuildRequires: R-clipr
BuildRequires: R-crayon
BuildRequires: R-vroom
BuildRequires: R-tzdb
BuildRequires: R-bslib
BuildRequires: R-fontawesome
BuildRequires: R-tinytex
BuildRequires: R-pillar
BuildRequires: R-cachem
BuildRequires: R-memoise
BuildRequires: R-mime
BuildRequires: R-sass
BuildRequires: R-utf8
BuildRequires: R-bit64
BuildRequires: R-progress
BuildRequires: R-bit
BuildRequires: R-prettyunits
BuildRequires: R-fs
BuildRequires: R-rappdirs
BuildRequires: cairo-devel
Suggests: R-pander
Suggests: R-shiny
Suggests: R-testthat
Suggests: R-rmarkdown
Suggests: R-gtable
Suggests: R-pdftools
Suggests: R-viridisLite
%description
Creation of patient profile visualizations for exploration, diagnostic
or monitoring purposes during a clinical trial. These static
visualizations display a patient-specific overview of the evolution
during the trial time frame of parameters of interest (as laboratory,
ECG, vital signs), presence of adverse events, exposure to a treatment;
associated with metadata patient information, as demography,
concomitant medication. The visualizations can be tailored for specific
domain(s) or endpoint(s) of interest. Visualizations are exported into
patient profile report(s) or can be embedded in custom report(s).
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%license %{rlibdir}/%{packname}/LICENSE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS
%{rlibdir}/%{packname}/R
%doc %{rlibdir}/%{packname}/doc
%{rlibdir}/%{packname}/examples
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/template
%changelog