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File R-pomp.spec of Package R-pomp

# Automatically generated by CRAN2OBS
# 
# Spec file for package pomp 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2024 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  pomp 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        5.9 
Release:        0 
Summary:        Statistical Inference for Partially Observed Markov Processes 
Group:          Development/Libraries/Other 
License:        GPL-3 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         pomp_5.9.tar.gz 
Requires:       R-base 
Requires:	R-digest
Requires:	R-mvtnorm
Requires:	R-deSolve
Requires:	R-coda
Requires:	R-data.table
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-digest
BuildRequires: 	R-mvtnorm
BuildRequires: 	R-deSolve-devel
BuildRequires: 	R-coda
BuildRequires: 	R-data.table
BuildRequires:  gcc gcc-c++ gcc-fortran
 
Suggests:	R-ggplot2
Suggests:	R-knitr
Suggests:	R-dplyr
Suggests:	R-tidyr
Suggests:	R-subplex
Suggests:	R-nloptr
%description 
Tools for data analysis with partially observed Markov process (POMP) 
models (also known as stochastic dynamical systems, hidden Markov 
models, and nonlinear, non-Gaussian, state-space models).  The package 
provides facilities for implementing POMP models, simulating them, and 
fitting them to time series data by a variety of frequentist and 
Bayesian methods.  It is also a versatile platform for implementation 
of inference methods for general POMP models. 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%{rlibdir}/%{packname}/CITATION
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/GPL
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS
%doc %{rlibdir}/%{packname}/NEWS.Rd
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/include
%{rlibdir}/%{packname}/libs
 
%changelog

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File R-pomp.spec of Package R-pomp

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