File R-viscomp.spec of Package R-viscomp
# Automatically generated by CRAN2OBS
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# Spec file for package viscomp
# This file is auto-generated using information in the package source,
# esp. Description and Summary. Improvements in that area should be
# discussed with upstream.
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%global packname viscomp
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 1.0.0
Release: 0
Summary: Visualize Multi-Component Interventions in Network Meta-Analysis
Group: Development/Libraries/Other
License: GPL (>= 3)
URL: http://cran.r-project.org/web/packages/%{packname}
Source: viscomp_1.0.0.tar.gz
Requires: R-base
Requires: R-circlize
Requires: R-dplyr
Requires: R-ggExtra
Requires: R-ggnewscale
Requires: R-ggplot2
Requires: R-Hmisc
Requires: R-netmeta
Requires: R-plyr
Requires: R-qgraph
Requires: R-reshape2
Requires: R-tibble
Requires: R-tidyr
Requires: R-GlobalOptions
Requires: R-shape
Requires: R-colorspace
Requires: R-cli
Requires: R-generics
Requires: R-glue
Requires: R-lifecycle
Requires: R-magrittr
Requires: R-pillar
Requires: R-R6
Requires: R-rlang
Requires: R-tidyselect
Requires: R-vctrs
Requires: R-colourpicker
Requires: R-gtable
Requires: R-miniUI
Requires: R-scales
Requires: R-shiny
Requires: R-shinyjs
Requires: R-isoband
Requires: R-withr
Requires: R-gridExtra
Requires: R-data.table
Requires: R-htmlTable
Requires: R-viridis
Requires: R-htmltools
Requires: R-base64enc
Requires: R-rmarkdown
Requires: R-knitr
Requires: R-Formula
Requires: R-meta
Requires: R-metafor
Requires: R-mvtnorm
Requires: R-magic
Requires: R-igraph
Requires: R-Rcpp
Requires: R-psych
Requires: R-lavaan
Requires: R-jpeg
Requires: R-png
Requires: R-corpcor
Requires: R-glasso
Requires: R-fdrtool
Requires: R-gtools
Requires: R-pbapply
Requires: R-abind
Requires: R-stringr
Requires: R-pkgconfig
Requires: R-purrr
Requires: R-cpp11
Requires: R-htmlwidgets
Requires: R-jsonlite
Requires: R-checkmate
Requires: R-rstudioapi
Requires: R-digest
Requires: R-fastmap
Requires: R-evaluate
Requires: R-highr
Requires: R-xfun
Requires: R-yaml
Requires: R-mnormt
Requires: R-pbivnorm
Requires: R-numDeriv
Requires: R-quadprog
Requires: R-metadat
Requires: R-lme4
Requires: R-CompQuadForm
Requires: R-xml2
Requires: R-readr
Requires: R-mathjaxr
Requires: R-utf8
Requires: R-GPArotation
Requires: R-bslib
Requires: R-fontawesome
Requires: R-jquerylib
Requires: R-tinytex
Requires: R-farver
Requires: R-labeling
Requires: R-RColorBrewer
Requires: R-viridisLite
Requires: R-httpuv
Requires: R-mime
Requires: R-xtable
Requires: R-sourcetools
Requires: R-later
Requires: R-promises
Requires: R-crayon
Requires: R-commonmark
Requires: R-cachem
Requires: R-stringi
Requires: R-memoise
Requires: R-sass
Requires: R-backports
Requires: R-minqa
Requires: R-nloptr
Requires: R-reformulas
Requires: R-RcppEigen
Requires: R-clipr
Requires: R-hms
Requires: R-vroom
Requires: R-tzdb
Requires: R-Rdpack
Requires: R-fs
Requires: R-rappdirs
Requires: R-bit64
Requires: R-progress
Requires: R-bit
Requires: R-prettyunits
Requires: R-rbibutils
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse}
# # Three others commonly needed
# BuildRequires: tex(ae.sty)
# BuildRequires: tex(fancyvrb.sty)
# BuildRequires: tex(inconsolata.sty)
# BuildRequires: tex(natbib.sty)
# %else
# BuildRequires: texlive
# %endif
# BuildRequires: texinfo
BuildRequires: fdupes
BuildRequires: R-base
BuildRequires: R-circlize
BuildRequires: R-dplyr
BuildRequires: R-ggExtra
BuildRequires: R-ggnewscale
BuildRequires: R-ggplot2
BuildRequires: R-Hmisc
BuildRequires: R-netmeta
BuildRequires: R-plyr
BuildRequires: R-qgraph
BuildRequires: R-reshape2
BuildRequires: R-tibble
BuildRequires: R-tidyr
BuildRequires: R-GlobalOptions
BuildRequires: R-shape
BuildRequires: R-colorspace
BuildRequires: R-cli
BuildRequires: R-generics
BuildRequires: R-glue
BuildRequires: R-lifecycle
BuildRequires: R-magrittr
BuildRequires: R-pillar
BuildRequires: R-R6
BuildRequires: R-rlang
BuildRequires: R-tidyselect
BuildRequires: R-vctrs
BuildRequires: R-colourpicker
BuildRequires: R-gtable
BuildRequires: R-miniUI
BuildRequires: R-scales
BuildRequires: R-shiny
BuildRequires: R-shinyjs
BuildRequires: R-isoband
BuildRequires: R-withr
BuildRequires: R-gridExtra
BuildRequires: R-data.table
BuildRequires: R-htmlTable
BuildRequires: R-viridis
BuildRequires: R-htmltools
BuildRequires: R-base64enc
BuildRequires: R-rmarkdown
BuildRequires: R-knitr
BuildRequires: R-Formula
BuildRequires: R-meta
BuildRequires: R-metafor
BuildRequires: R-mvtnorm
BuildRequires: R-magic
BuildRequires: R-igraph
BuildRequires: R-Rcpp-devel
BuildRequires: R-psych
BuildRequires: R-lavaan
BuildRequires: R-jpeg
BuildRequires: R-png
BuildRequires: R-corpcor
BuildRequires: R-glasso
BuildRequires: R-fdrtool
BuildRequires: R-gtools
BuildRequires: R-pbapply
BuildRequires: R-abind
BuildRequires: R-stringr
BuildRequires: R-pkgconfig
BuildRequires: R-purrr
BuildRequires: R-cpp11-devel
BuildRequires: R-htmlwidgets
BuildRequires: R-jsonlite
BuildRequires: R-checkmate
BuildRequires: R-rstudioapi
BuildRequires: R-digest
BuildRequires: R-fastmap
BuildRequires: R-evaluate
BuildRequires: R-highr
BuildRequires: R-xfun
BuildRequires: R-yaml
BuildRequires: R-mnormt
BuildRequires: R-pbivnorm
BuildRequires: R-numDeriv
BuildRequires: R-quadprog
BuildRequires: R-metadat
BuildRequires: R-lme4
BuildRequires: R-CompQuadForm
BuildRequires: R-xml2
BuildRequires: R-readr
BuildRequires: R-mathjaxr
BuildRequires: R-utf8
BuildRequires: R-GPArotation
BuildRequires: R-bslib
BuildRequires: R-fontawesome
BuildRequires: R-jquerylib
BuildRequires: R-tinytex
BuildRequires: R-farver
BuildRequires: R-labeling
BuildRequires: R-RColorBrewer
BuildRequires: R-viridisLite
BuildRequires: R-httpuv
BuildRequires: R-mime
BuildRequires: R-xtable
BuildRequires: R-sourcetools-devel
BuildRequires: R-later
BuildRequires: R-promises
BuildRequires: R-crayon
BuildRequires: R-commonmark
BuildRequires: R-cachem
BuildRequires: R-stringi
BuildRequires: R-memoise
BuildRequires: R-sass
BuildRequires: R-backports
BuildRequires: R-minqa
BuildRequires: R-nloptr
BuildRequires: R-reformulas
BuildRequires: R-RcppEigen-devel
BuildRequires: R-clipr
BuildRequires: R-hms
BuildRequires: R-vroom
BuildRequires: R-tzdb
BuildRequires: R-Rdpack
BuildRequires: R-fs
BuildRequires: R-rappdirs
BuildRequires: R-bit64
BuildRequires: R-progress
BuildRequires: R-bit
BuildRequires: R-prettyunits
BuildRequires: R-rbibutils
Suggests: R-covr
Suggests: R-knitr
Suggests: R-rmarkdown
%description
A set of functions providing several visualization tools for exploring
the behavior of the components in a network meta-analysis of
multi-component (complex) interventions: - components descriptive
analysis - heat plot of the two-by-two component combinations - leaving
one component combination out scatter plot - violin plot for specific
component combinations' effects - density plot for components' effects
- waterfall plot for the interventions' effects that differ by a
certain component combination - network graph of components - rank heat
plot of components for multiple outcomes. The implemented tools are
described by Seitidis et al. (2023) <doi:10.1002/jrsm.1617>.
%prep
%setup -q -c -n %{packname}
# the next line is needed, because we build without --clean in between two packages
rm -rf ~/.R
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes -s %{buildroot}%{rlibdir}
#%%check
#%%{_bindir}/R CMD check %%{packname}
%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%changelog
