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File R-release.diff of Package R (Revision 0421c45c44c21fc5b5d3860df32cbae1)

Currently displaying revision 0421c45c44c21fc5b5d3860df32cbae1 , Show latest

# cd *inside* the ...../R-3.2.5/ directory, and do
# zcat ..../R-release.diff.gz | patch -p1 -E
# --------- =====
# You need a "g[un]zip capable zcat", and canNOT use Solaris "patch"!
# Rather get ("gzip" and) "diffutils" from any GNU mirror.
#
diff -ru -P -x .mirror -x ls_lR -x Old R-release-orig/SVN-REVISION R-patched/SVN-REVISION
--- R-release-orig/SVN-REVISION	2016-04-14 15:46:46.000000000 +0200
+++ R-patched/SVN-REVISION	2016-04-27 02:42:55.925845000 +0200
@@ -1,2 +1,2 @@
-Revision: 70478
-Last Changed Date: 2016-04-14
+Revision: 70550
+Last Changed Date: 2016-04-18
diff -ru -P -x .mirror -x ls_lR -x Old R-release-orig/VERSION R-patched/VERSION
--- R-release-orig/VERSION	2016-04-14 13:36:31.000000000 +0200
+++ R-patched/VERSION	2016-04-15 02:41:09.186030000 +0200
@@ -1 +1 @@
-3.2.5
+3.2.5 Patched
Binary files R-release-orig/doc/NEWS.pdf and R-patched/doc/NEWS.pdf differ
diff -ru -P -x .mirror -x ls_lR -x Old R-release-orig/doc/html/R-admin.html R-patched/doc/html/R-admin.html
--- R-release-orig/doc/html/R-admin.html	2016-04-14 16:06:38.000000000 +0200
+++ R-patched/doc/html/R-admin.html	2016-04-27 03:00:28.092273958 +0200
@@ -1,6 +1,6 @@
 <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
 <html>
-<!-- This manual is for R, version 3.2.5 (2016-04-14).
+<!-- This manual is for R, version 3.2.5 Patched (2016-04-18).
 
 Copyright (C) 2001-2016 R Core Team
 
@@ -333,7 +333,7 @@
 
 This is a guide to installation and administration for R.
 
-This manual is for R, version 3.2.5 (2016-04-14).
+This manual is for R, version 3.2.5 Patched (2016-04-18).
 
 Copyright &copy; 2001&ndash;2016 R Core Team
 
@@ -1323,7 +1323,7 @@
 perhaps for some network-mounted systems).
 
 Installation is via the installer
-<samp>R-3.2.5-win.exe</samp>. Just double-click on the icon and
+<samp>R-3.2.5patched-win.exe</samp>. Just double-click on the icon and
 follow the instructions. When installing on a 64-bit version of Windows
 the options will include 32- or 64-bit versions of R (and the default is
 to install both). You can uninstall R from the Control Panel.
@@ -1721,7 +1721,7 @@
 installation (in double quotes if it contains spaces or backslashes).
 
 Both methods create an executable with a standard name such as
-<samp>R-3.2.5-win.exe</samp>, so please rename it to indicate that
+<samp>R-3.2.5patched-win.exe</samp>, so please rename it to indicate that
 it is customized. If you intend to distribute a customized
 installer please do check that license requirements are met &ndash; note that
 the installer will state that the contents are distributed under GPL
@@ -1780,21 +1780,21 @@
 </pre></div>
 
 which will result in a file with a name like
-<samp>R-3.2.5-win32.msi</samp>. This can be double-clicked to be
+<samp>R-3.2.5patched-win32.msi</samp>. This can be double-clicked to be
 installed, but those who need it will know what to do with it (usually
 by running <code>msiexec /i</code> with additional options). Properties
 that users might want to set from the <code>msiexec</code> command line
 include &lsquo;<samp>ALLUSERS</samp>&rsquo;, &lsquo;<samp>INSTALLDIR</samp>&rsquo; (something like
-<samp>c:\Program Files\R\R-3.2.5</samp>) and &lsquo;<samp>RMENU</samp>&rsquo; (the path
+<samp>c:\Program Files\R\R-3.2.5patched</samp>) and &lsquo;<samp>RMENU</samp>&rsquo; (the path
 to the &lsquo;<samp>R</samp>&rsquo; folder on the start menu) and &lsquo;<samp>STARTDIR</samp>&rsquo; (the
 starting directory for R shortcuts, defaulting to something like
 <samp>c:\Users\name\Documents\R</samp>).
 
 The MSI installer can be built both from a 32-bit build of R
-(<samp>R-3.2.5-win32.msi</samp>) and from a 64-bit build of R
-(<samp>R-3.2.5-win64.msi</samp>, optionally including 32-bit files
+(<samp>R-3.2.5patched-win32.msi</samp>) and from a 64-bit build of R
+(<samp>R-3.2.5patched-win64.msi</samp>, optionally including 32-bit files
 by setting the macro <code>HOME32</code>, when the name is
-<samp>R-3.2.5-win.msi</samp>). Unlike the main installer, a 64-bit
+<samp>R-3.2.5patched-win.msi</samp>). Unlike the main installer, a 64-bit
 MSI installer can only be run on 64-bit Windows.
 
 Thanks to David del Campo (Dept of Statistics, University of Oxford)
@@ -5795,7 +5795,7 @@
 <a name="The-Inno-Setup-installer-1"></a>
 <h3 class="section">D.2 The Inno Setup installer</h3>
 
-To make the installer package (<samp>R-3.2.5-win.exe</samp>) we
+To make the installer package (<samp>R-3.2.5patched-win.exe</samp>) we
 currently require the Unicode version of Inno Setup 5.3.7 or later from
 <a href="http://jrsoftware.org/">http://jrsoftware.org/</a>. This is not included in
 <samp>Rtools*.exe</samp>.
diff -ru -P -x .mirror -x ls_lR -x Old R-release-orig/src/library/Recommended/Makefile.in R-patched/src/library/Recommended/Makefile.in
--- R-release-orig/src/library/Recommended/Makefile.in	2016-04-14 13:32:44.000000000 +0200
+++ R-patched/src/library/Recommended/Makefile.in	2016-04-17 17:45:10.571007000 +0200
@@ -116,6 +116,7 @@
 mgcv.ts: nlme.ts MASS.ts Matrix.ts
 nlme.ts: lattice.ts
 class.ts: MASS.ts
+survival.ts: Matrix.ts
 ## and for static html links
 boot.ts: MASS.ts survival.ts
 cluster.ts: MASS.ts
diff -ru -P -x .mirror -x ls_lR -x Old R-release-orig/src/library/Recommended/Makefile.win R-patched/src/library/Recommended/Makefile.win
--- R-release-orig/src/library/Recommended/Makefile.win	2016-04-14 13:32:44.000000000 +0200
+++ R-patched/src/library/Recommended/Makefile.win	2016-04-18 17:45:09.381882000 +0200
@@ -58,6 +58,7 @@
 mgcv.ts: nlme.ts MASS.ts Matrix.ts
 nlme.ts: lattice.ts
 class.ts: MASS.ts
+survival.ts: Matrix.ts
 ## and for static html links
 boot.ts: MASS.ts survival.ts
 cluster.ts: MASS.ts
Binary files R-release-orig/src/library/Recommended/Matrix.tgz and R-patched/src/library/Recommended/Matrix.tgz differ
Only in R-release-orig/src/library/Recommended: Matrix_1.2-4.tar.gz
Binary files R-release-orig/src/library/Recommended/Matrix_1.2-5.tar.gz and R-patched/src/library/Recommended/Matrix_1.2-5.tar.gz differ
Binary files R-release-orig/src/library/Recommended/cluster.tgz and R-patched/src/library/Recommended/cluster.tgz differ
Only in R-release-orig/src/library/Recommended: cluster_2.0.3.tar.gz
Binary files R-release-orig/src/library/Recommended/cluster_2.0.4.tar.gz and R-patched/src/library/Recommended/cluster_2.0.4.tar.gz differ
Binary files R-release-orig/src/library/Recommended/nlme.tgz and R-patched/src/library/Recommended/nlme.tgz differ
Only in R-release-orig/src/library/Recommended: nlme_3.1-125.tar.gz
Binary files R-release-orig/src/library/Recommended/nlme_3.1-127.tar.gz and R-patched/src/library/Recommended/nlme_3.1-127.tar.gz differ
Binary files R-release-orig/src/library/Recommended/survival.tgz and R-patched/src/library/Recommended/survival.tgz differ
Only in R-release-orig/src/library/Recommended: survival_2.38-3.tar.gz
Binary files R-release-orig/src/library/Recommended/survival_2.39-2.tar.gz and R-patched/src/library/Recommended/survival_2.39-2.tar.gz differ
Binary files R-release-orig/src/library/grid/inst/doc/displaylist.pdf and R-patched/src/library/grid/inst/doc/displaylist.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/frame.pdf and R-patched/src/library/grid/inst/doc/frame.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/grid.pdf and R-patched/src/library/grid/inst/doc/grid.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/grobs.pdf and R-patched/src/library/grid/inst/doc/grobs.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/interactive.pdf and R-patched/src/library/grid/inst/doc/interactive.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/locndimn.pdf and R-patched/src/library/grid/inst/doc/locndimn.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/moveline.pdf and R-patched/src/library/grid/inst/doc/moveline.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/nonfinite.pdf and R-patched/src/library/grid/inst/doc/nonfinite.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/plotexample.pdf and R-patched/src/library/grid/inst/doc/plotexample.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/rotated.pdf and R-patched/src/library/grid/inst/doc/rotated.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/saveload.pdf and R-patched/src/library/grid/inst/doc/saveload.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/sharing.pdf and R-patched/src/library/grid/inst/doc/sharing.pdf differ
Binary files R-release-orig/src/library/grid/inst/doc/viewports.pdf and R-patched/src/library/grid/inst/doc/viewports.pdf differ
Binary files R-release-orig/src/library/parallel/inst/doc/parallel.pdf and R-patched/src/library/parallel/inst/doc/parallel.pdf differ
Binary files R-release-orig/src/library/utils/inst/doc/Sweave.pdf and R-patched/src/library/utils/inst/doc/Sweave.pdf differ

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File R-release.diff of Package R (Revision 0421c45c44c21fc5b5d3860df32cbae1)

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