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File coot.spec of Package coot
Name: coot URL: http://biop.ox.ac.uk/coot/ %if 0%{?suse_version} BuildRequires: fdupes %endif BuildRequires: automake libtool BuildRequires: gcc-c++ BuildRequires: glib2-devel >= 1.2.8 Requires: glib2 >= 1.2.8 BuildRequires: gtk2-devel >= 0.99.7 Requires: gtk2 >= 0.99.7 BuildRequires: gsl-devel >= 1.3 Requires: gsl >= 1.3 BuildRequires: gtkglarea2-devel Requires: gtkglarea2 BuildRequires: gtkglext-devel BuildRequires: libglade2-devel BuildRequires: freeglut-devel Requires: freeglut BuildRequires: clipper-devel BuildRequires: libmmdb-devel BuildRequires: ccp4-devel BuildRequires: fftw2-devel BuildRequires: python-devel BuildRequires: libgnomecanvas-devel BuildRequires: swig License: GPL-3.0 Group: Productivity/Scientific/Chemistry AutoReqProv: on Summary: Crystallographic Object-Oriented Toolkit Version: 0.6.2 Release: 1.1 Source0: %{name}-%{version}.tar.bz2 #Patch1: 1-fftw.patch #Patch2: 2-assignment.patch #Patch3: 3-strcmp.patch #Patch4: 4-libpng.patch Patch5: 5-coot-string.patch Patch6: 6-coot-array-index.patch Patch7: 7-coot-unistd.patch Patch8: 8-coot-redeclare.patch BuildRoot: %{_tmppath}/%{name}-%{version}-build %define docdir %{_prefix}/share/doc/packages/%{name} %if 0%{?sles_version} == 11 %define extracppflags -DNEED_OPENMP_PRAGMA_HACK %endif %description Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data. Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization... Authors -------- Paul Emsley %package devel Summary: Crystallographic Object-Oriented Toolkit Group: Development/Libraries/C and C++ Requires: %{name} = %{version} %description devel Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data. Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization... This package contains headers and libraries needed for development. Authors -------- Paul Emsley %package libs Summary: Crystallographic Object-Oriented Toolkit Group: Productivity/Scientific/Chemistry Requires: %{name} = %{version} %description libs Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data. Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization... This package contains shared libraries. Authors -------- Paul Emsley %prep %setup -q %patch5 -p1 %patch6 -p1 %patch7 -p1 %patch8 -p1 %build aclocal autoreconf -f -i %configure CPPFLAGS="-I%{_includedir}/mmdb %{?extracppflags}" LDFLAGS=-L%{_libdir}/ccp4 \ fftw_pre=d ccp4c=ccp4c \ --with-ssmlib-prefix=%{_prefix} --disable-static \ --with-gtk2 \ --includedir=%{_includedir}/%{name} --libdir=%{_libdir}/%{name} sed 's/|-threads/&|-fopenmp/' -i libtool make %{?jobs:-j %jobs} %install make DESTDIR=$RPM_BUILD_ROOT install rm $RPM_BUILD_ROOT%{_libdir}/%{name}/*.la %if 0%{?suse_version} %fdupes $RPM_BUILD_ROOT %endif %clean rm -rf $RPM_BUILD_ROOT %files %defattr(-,root,root) %{_bindir}/bfactan %{_bindir}/coot %{_bindir}/coot-real %{_bindir}/density-score-by-residue %{_bindir}/density-score-by-residue-real %{_bindir}/findligand %{_bindir}/findligand-real %{_bindir}/findwaters %{_bindir}/findwaters-real %{_bindir}/fix-nomenclature-errors %dir %{_datadir}/%{name} %{_datadir}/%{name}/* %files devel %defattr(-,root,root) %dir %{_includedir}/coot %{_includedir}/coot/* %{_libdir}/coot/*.so %files libs %defattr(-,root,root) %dir %{_libdir}/coot %{_libdir}/coot/*.so.* %changelog
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