File hdf5.changes of Package hdf5.24260

Wed May  4 06:39:53 UTC 2022 - Egbert Eich <>

- Security Fix:
  Add configure option --disable-hltools to disable GIF tools as
  recommended in the 1.10.8 release:
  CVE-2018-17433 (bsc#1109565),
  CVE-2018-17436 (bsc#1109568),
  CVE-2020-10809 (bsc#1167404).

Thu Apr  7 23:51:05 UTC 2022 - Christoph Junghans <>

- add hdf5-wrappers.patch from Fedora, so strip flags from
  wrappers and prefer shared linking
- add missing zlib-devel devel dep

Thu Mar 31 08:25:44 UTC 2022 - Ben Greiner <>

- Add hdf5-1.10.8-pr1494-fix-release-check-version.patch
  * boo#1179521, boo#1196682, gh#HDFGroup/hdf5#1494
  * Avoids package crashes due to an overeager version check.
    Packages depending on the shared libraries are not being
    rebuilt in Factory after a patchlevel version bump of hdf5
    without SONAME changes.

Wed Feb 16 11:18:17 UTC 2022 - Atri Bhattacharya <>

- Update to version 1.10.8:
  * Added new option to control the build of High-Level tools
  * Adds C++ Autotools configuration file for Intel
  * Adds C++ Autotools configuration file for PGI
  * Updates PGI C options
  * CMake will now run the shell script tests in test/ by default
  * Removed unused HDF5_ENABLE_HSIZET option from CMake
  * CMake no longer builds the C++ library by default
  * Removal of pre-VS2015 work-arounds
  * Add CMake variable HDF5_LIB_INFIX
  * Added a configure-time option to control certain compiler
  * CMake option to build the HDF filter plugins project as an
    external project
  * Added a configure-time option to consider certain compiler
  * Autotools and CMake target added to produce doxygen generated
  * CMake option to build the HDF filter plugins project as an
    external project
  * Added CMake option to format source files
  * Change how the release part of version, in major.minor.release
    is checked
  * H5Gcreate1() now rejects size_hint parameters larger than
  * H5Pset_fapl_log() no longer crashes when passed an invalid
    fapl ID
  * Fixes a segfault when H5Pset_mdc_log_options() is called
    multiple times
  * File locking now works on Windows
  * H5Epush_ret() now requires a trailing semicolon
  * Improved performance of H5Sget_select_elem_pointlist
  * H5Fget_name_f fixed to handle correctly trailing whitespaces
    and newly allocated buffers.
  * Added new H5S functions.
  * Refactored the perform tools and removed dependencies on test
  * h5repack added help text for user-defined filters.
  * Doxygen documentation is available when configured and
  * Fixed CVE-2018-17432 (bsc#1109564)
  * Fixed a segmentation fault
  * Detection of simple data transform function "x"
  * Fixed CVE-2020-10810 - an invalid read and memory leak when
    parsing (bsc#1167401)
  * Fixed CVE-2018-14460 (bsc#1102175)
  * Fixed CVE-2018-11206 (bsc#1093657)
    (same issue as CVE-2018-14032 (bsc#1101474))
  * Fixed CVE-2018-14033 (bsc#1101471)
    (same issue as CVE-2020-10811 (bsc#1167405))
  * Remove underscores on header file guards
  * class:
    - Convert the entire byte array into a 1-d array of the
      desired type, rather than performing 1 conversion per row;
    - Use the Java Arrays method copyOfRange to grab the section
      of the array from (1) that is desired to be inserted into
      the destination array.
  * Corrected path searched by CMake find_package command
  * Corrected pkg-config compile script
  * Fixed CMake C++ compiler flags
  * Autotools clang debug optimization level change
  * Better support for libaec (open-source Szip library) in CMake
  * Refactor CMake configure for Fortran
  * Remove arbitrary warning flag groups from CMake builds
  * Reclassify CMake messages, to allow new modes and --log-level
  * Fixes Autotools determination of the stat struct having an
    st_blocks field
  * Changed how h5dump and h5ls identify long double.
  * Fixed tools argument parsing.
  * Updated doxygen comments with changes for release
- Minor rebase of patches to apply cleanly.

Fri Jan 29 22:05:44 UTC 2021 - Egbert Eich <>

- Fix, write so versions to file being included.

Fri Nov  6 10:41:02 UTC 2020 - Ana Guerrero Lopez <>

- Update to version 1.10.7
  * Add metadata cache optimization to reduce skip list usage.
  * Add BEST_EFFORT value to HDF5_USE_FILE_LOCKING environment variable.
  * Add H5Pset/get_file_locking() API calls.
  * Add Mirror VFD.
    Use TCP/IP sockets to perform write-only (W/O) file I/O on a remote
    machine. Must be used in conjunction with the Splitter VFD.
  * Add Splitter VFD.
    Maintain separate R/W and W/O channels for "concurrent" file writes
    to two files using a single HDF5 file handle.
  * Fixed an assertion failure in the parallel library when collectively
   filling chunks.
  * Fortran/C++ libs: Add wrappers for H5Pset/get_file_locking() API calls.
  * Added new Fortran parameters:
  * Add new Fortran API: h5pget_libver_bounds_f.
  * h5repack added options to control how external links are handled.
  * The tools library was updated by standardizing the error stack process.
  * The H5DSis_scale function was updated to return "not a dimension scale" (0)
    instead of failing (-1), when CLASS or DIMENSION_SCALE attributes are
    not written according to Dimension Scales Specification.
  * Bug Fixes:
    + Fix bug and simplify collective metadata write operation when some ranks
      have no entries to contribute.  This fixes parallel regression test
      failures with IBM SpectrumScale MPI on the Summit system at ORNL.
    + Fixed use-of-uninitialized-value error.
      Appropriate initialization of local structs was added to remove the
      use-of-uninitialized-value errors reported by MemorySanitizer.
    + Creation of dataset with optional filter.
      A fix is applied to allow the creation of a dataset in such
      situation, as specified in the user documentation.
    + Explicitly declared dlopen to use RTLD_LOCAL.
    + H5Sset_extent_none() sets the dataspace class to H5S_NO_CLASS which
      causes asserts/errors when passed to other dataspace API calls.
    + Fixed the segmentation fault when reading attributes with multiple threads
      The problem was fixed by setting the file pointer to the current opened
      file pointer when the attribute was accessed.  Similar patch up was done
      before when reading dataset with variable length string datatype.
    + Don't allocate an empty (0-dimensioned) chunked dataset's chunk
      index, until the dataset's dimensions are increased.
    + Fortan: Corrected INTERFACE INTENT(IN) to INTENT(OUT) for buf_size in
    + h5diff fixed a command line parsing error.
    + h5diff added a command line option to ignore attributes.
    + h5diff added another level to the verbose argument to print filenames.
    + h5repack was fixed to repack the reference attributes properly.
  * For details check:
- version 1.10.6
  * Added S3 and HDFS Virtual File Drivers (VFDs) to HDF5.
    Instructions to enable them when configuring HDF5 on Linux and Mac
    may be found at.
  * Added new wrappers for H5Pset/get_create_intermediate_group()
  * h5repack was fixed to repack datasets with external storage
    to other types of storage.
  * Bug Fixes:
    + Improved performance when creating a large number of small datasets by
      retrieving default property values from the API context instead of doing
      skip list searches. More work is required to achieve parity with HDF5 1.8.
    + Fixed user-created data access properties not existing in the property list
      returned by H5Dget_access_plist. Thanks to Steven Varga for submitting a
      reproducer and a patch.
    + Inappropriate linking with deprecated MPI C++ libraries.
      HDF5 does not define *_SKIP_MPICXX in the public headers, so applications
      can inadvertently wind up linking to the deprecated MPI C++ wrappers.
      MPICH_SKIP_MPICXX and OMPI_SKIP_MPICXX have both been defined in H5public.h
      so this should no longer be an issue. HDF5 makes no use of the deprecated
      MPI C++ wrappers.
    + fcntl(2)-based file locking incorrectly passed the lock argument struct
      instead of a pointer to the struct, causing errors on systems where
      flock(2) is not available.
      This bug affects HDF5 1.10.0 through 1.10.5.
      fcntl(2)-based file locking now correctly passes the struct pointer.
    + Fixed a bug caused by a bad tag value when condensing object header
    + Fixed an issue when creating a file with non-default file space info
      together with library high bound setting to H5F_LIBVER_V18.
      This was fixed by setting and checking the proper version in the file
      space info message based on the library low and high bounds when creating
      and opening the HDF5 file.
    + Fixed an issue where copying a version 1.8 dataset between files using
      H5Ocopy fails due to an incompatible fill version.
    + Fixed a bug that would cause an error or cause fill values to be
      incorrectly read from a chunked dataset using the "single chunk" index if
    + Fixed a bug that could cause an error or cause fill values to be
      incorrectly read from a dataset that was written to using H5Dwrite_chunk
      if the dataset was not closed after writing.
    + Fixed memory leak in scale offset filter.
  * For details check:
- Security bugs fixed: 
  * CVE-2018-13870: heap-based buffer over-read in the function 
    H5O_link_decode in H5Olink.c  (bsc#1101493)
  * CVE-2018-13869: memcpy parameter overlap in the function 
    H5O_link_decode in H5Olink.c (bsc#1101495)
  * CVE-2018-17438:  A SIGFPE signal is raised in the function 
    H5D__select_io() of H5Dselect.c in the HDF HDF5 through 1.10.3
    library during an attempted parse of a crafted HDF file, 
    because of incorrect protection against division
  * CVE-2018-17435: A heap-based buffer over-read in H5O_attr_decode() 
    in H5Oattr.c in the HDF HDF5 through 1.10.3 library allows 
    attackers to cause a denial of service via a crafted HDF5 file. 
- Refresh patches

Thu Jul 23 16:33:58 UTC 2020 - Egbert Eich <>

- Add build support for gcc10 to HPC build (bsc#1174439). 

Mon Jul 20 14:48:42 UTC 2020 - Egbert Eich <>

- Add missing openmpi4 flavors.
- Enable build of non-HPC flavors for all non-HPC builds.

Wed Jun 24 07:32:58 UTC 2020 - Alin M Elena <>

- add openmpi4 packages to build and disable build for leap

Fri Apr 17 14:54:44 UTC 2020 - Egbert Eich <>

- Fix .so number in baselibs.conf for libhdf5_fortran libs (boo#1169793).

Thu Apr  2 07:49:26 UTC 2020 - Egbert Eich <>

- Fix library link flags on pkg-config file for HPC builds (boo#1134298).

Mon Jan 20 00:47:04 UTC 2020 - Stefan Brüns <>

- Remove bogus undefines of suffix and mpi_flavor. suffix is the
  name of an RPM built-in (like expand or echo), and since RPM 4.15
  trying to alter a built-in is an error. Fixes built of serial
  flavor on Tumbleweed. See

Tue Dec 10 16:30:03 UTC 2019 - Stefan Brüns <>

- Add compat provides for renamed hdf5-openmpi{,-devel} package,
- Fix openmpi1 package naming for SLE/Leap <= 15.1

Thu Nov 28 18:13:10 UTC 2019 - Egbert Eich <>

- Add HPC support for gcc8 and gcc9 (jsc#SLE-7766 & jsc#SLE-8604).

Thu Nov 28 15:54:19 UTC 2019 - Egbert Eich <>

- Disable openmpi1 builds for SLE/Leap > 15.1.
- Enable openmpi3 builds for Leap and SLE > 15.1 (jsc#SLE-7773).

Thu Oct 24 06:37:26 UTC 2019 - Nicolas Morey-Chaisemartin <>

- openmpi has been renamed into openmpi1

Tue Sep 10 07:54:05 UTC 2019 - Ana Guerrero Lopez <>

- Use -ffat-lto-objects to provide a proper static library. 

Tue Sep  3 10:17:31 UTC 2019 - Ana Guerrero Lopez <>

- Re-list hdf5-mpi.patch in the spec file for the sake of a avoiding
  a script rejecting the package automatically.

Fri Aug 23 09:58:01 UTC 2019 - Ana Guerrero Lopez <>

- Update to version 1.10.5: (jsc#SLE-8501)
- Security bugs fixed: 
  * CVE-2018-17233: A SIGFPE signal is raised in the function 
  H5D__create_chunk_file_map_hyper. (bsc#1109166)
  * CVE-2018-17234: Memory leak in the H5O__chunk_deserialize() 
  function in H5Ocache.c (bsc#1109167)
  * CVE-2018-17434: A SIGFPE signal is raised in function apply_filters()
  of h5repack_filters.c (bsc#1109566)
  * CVE-2018-17437: Memory leak in the H5O_dtype_decode_helper() function
  in H5Odtype.c. (bsc#1109569)
  * CVE-2018-17237: A SIGFPE signal is raised in the function 
  H5D__chunk_set_info_real (bsc#1109168) (commit 4e31361d).
- Bump fortran library soname, sonum_F from 100 to 102.
- Adjust library installation path, use %hpc_prefix/lib64 in x86_64 
  and %hpc_libdir in all other cases
- Patches refreshed:
  * hdf5-LD_LIBRARY_PATH.patch
  * hdf5-1.8.11-abort_unknown_host_config.patch
  * PPC64LE-Fix-long-double-handling.patch
  * hdf5-Remove-timestamps-from-binaries.patch
  * Disable-phdf5-tests.patch
- Patch disabled, upstream have changed the file that was being patched,
  while it could be ported, it's unknown if this patch is still needed.
  * hdf5-mpi.patch
- Patch removed, merged upstream
  * 0001-Fix-return-value-in-test_libver_bounds_open.patch

Thu Jul  4 11:45:55 UTC 2019 - Egbert Eich <>

- Since build machine size issues do not seem to go way, make
  the %check stage optional: enable with '--with check'.

Thu Apr 25 08:51:47 UTC 2019 - Christian Goll <>

- set higher constraints for succesfull mpich tests (boo#1133222) 

Mon Apr  1 12:41:23 UTC 2019 -

- Add _constraints to avoid transient build error ppc64le

Sat Mar  9 15:04:06 UTC 2019 - Stefan Brüns <>

- Update URL: and Source: to use https://.

Fri Mar  1 12:19:33 UTC 2019 - Egbert Eich <>

- Like on PPC ignore transient 'make check' failures on aarch64.

Fri Mar  1 09:37:54 UTC 2019 - Egbert Eich <>

- Remove ringdisabled magic as hdf5 is no longer a ring package.
  This should resolve a number of problems in the review channels
  for Factory with packages requiring hdf5 libs.

Wed Feb 13 10:37:28 UTC 2019 - Egbert Eich <>

- Consolidate use of openmpi1, openmpi2, openmpi3 for non-HPC builds.

Fri Jan 25 19:14:31 UTC 2019 -

- Remove dependency to the hdf5-devel-data file for HPC:
  Currently, there are no macro files for HPC - these files
  will have to be handled differently.
- Re-disable all non-HPC builds for SLE.

Mon Jan 14 08:56:39 UTC 2019 -

- Reenable 'serial' build for SLE: this build creates hdf5-devel-data.

Thu Jan  3 11:39:58 UTC 2019 -

- Do not build non-HPC on SLE: This helps to save some build

Wed Dec 19 19:54:05 UTC 2018 - Todd R <>

- Use upstream-recommended %{_rpmconfigdir}/macros.d directory
  for the rpm macros.

Wed Dec 12 15:28:48 UTC 2018 - Todd R <>

- Also build for regular openmpi2 and openmpi3

Thu Nov 22 18:15:55 UTC 2018 - Stefan Brüns <>

- Build HDF5 C++ bindings also for the MPI variants, there is no reason
  not to do it.
- Enable sz2 support also for MPI variants.

Mon Nov 19 08:52:43 UTC 2018 -

- Replace git-archive generated by downloaded tar-ball.

Sat Nov 17 17:21:00 UTC 2018 -

- Update to 1.10.4:
  * Update Disable-phdf5-tests.patch
  * Replace and update hdf5-buildcompare.patch by

Fri Nov 16 23:09:01 UTC 2018 -

- Remove lib*_cpp and lib*_hl_cpp dependencies for MPI for the time

Sun Nov 11 12:15:14 UTC 2018 -

- Create main master package, fix dependencies.

Fri Sep 21 14:50:12 UTC 2018 - Stefan Brüns <>

- Update to 1.10.3:
- Update to 1.10.2:
- Bump soversions (101 -> 103) for libhdf5 and libhdf5_cpp
- Drop Fix-warnings-for-missing-returns.patch, fixed upstream
- Add 0001-Fix-return-value-in-test_libver_bounds_open.patch
- Rebase patches (tab / space conversion):
  * PPC64LE-Fix-long-double-handling.patch
  * hdf5-buildcompare.patch
  * hdf5-mpi.patch
- Rebase Disable-phdf5-tests.patch
- Security bugs fixed: 
  * CVE-2017-17505: NULL pointer dereference in the function
    H5O_pline_decode allowing for DoS via crafted file (bsc#1072087)
  * CVE-2017-17506: Out of bounds read in the function 
    H5Opline_pline_decode (bsc#1072090)
  * CVE-2017-17508: divide-by-zero vulnerability in function 
    H5T_set_loc (bsc#1072108)
  * CVE-2017-17509: out of bounds write vulnerability in function 
    H5G__ent_decode_vec (bsc#1072111)
  * CVE-2018-11202: NULL pointer dereference in H5S_hyper_make_spans 
    in H5Shyper.c allows a remote denial of service attack (bsc#1093641)
  * CVE-2018-11203: division by zero in H5D__btree_decode_key in H5Dbtree.c
    It could allow a remote denial of service attack (bsc#1093649)
  * CVE-2018-11204: A NULL pointer dereference was discovered in 
    H5O__chunk_deserialize in H5Ocache.c (bsc#1093655)
  * CVE-2018-11206: A out of bounds read was discovered 
    in H5O_fill_new_decode and H5O_fill_old_decode in H5Ofill.c
  * CVE-2018-11207: division by zero was discovered in H5D__chunk_init 
    in H5Dchunk.c (bsc#1093653)

Tue Jun 19 06:15:06 UTC 2018 -

- Handle license file using %license where applicable.
- Package example package also for HPC build and create
  a master file for it.

Fri Apr 27 14:20:25 UTC 2018 -

- Fix HPC library master packages dependency: make it require
  the correct flavor (bsc#1091237).

Sat Apr  7 22:31:05 UTC 2018 -

- Only build one examples package for all flavors, do not
  include dependencies as these would be flavor specific

Sat Mar 31 23:53:50 UTC 2018 -

- Fix some typos, one trivial, two mispelled macros

Sat Feb 10 23:04:47 UTC 2018 -

- Trim description for size and drop most of the marketing blurb.
  Fix RPM groups.

Sat Feb 10 17:40:10 UTC 2018 -

- Make module files package arch dependent: it
  contains arch-dependent paths (boo#1080442).

Sat Feb 10 07:31:46 UTC 2018 -

- Prepend PKG_CONFIG_PATH in modules file (boo#1080426).

Fri Feb  9 20:10:17 UTC 2018 -

- Add support for openmpi2 for HPC (FATE#325089).

Fri Feb  9 13:48:43 UTC 2018 -

- Fix summary in module files (bnc#1080259)

Thu Feb  8 11:37:06 UTC 2018 -

- Disable %check stage for mpich builds on s390(x) (bsc#1080022).

Fri Jan 12 15:38:59 UTC 2018 -

- Disable the openmpi3 flavor in some products.

Fri Jan  5 18:34:20 UTC 2018 -

- Switch from gcc6 to gcc7 as additional compiler flavor for HPC on SLES.
- Add support for mpich and openmpi3 for HPC.

Thu Nov  9 15:02:35 UTC 2017 -

-  temporarily disable make check for PowerPC boo#1058563

Tue Nov  7 13:23:40 UTC 2017 -

- Update to 1.10.1:
- Fix-warnings-for-missing-returns.patch:
  replace: hdf5-non_void_return.patch
- PPC64LE-Fix-long-double-handling.patch:
  replace: hdf5-ldouble-ppc64le.patch
- Disable-phdf5-tests.patch:
  replace: hdf5_disable_testphdf5.patch
- Disabling validation tests for the MPI variant for now as they 
  seem to cause issues in OBS.

Thu Oct 26 15:51:18 UTC 2017 -

- Fix name: baselib.conf -> baselibs.conf

Sun Oct 22 08:46:29 UTC 2017 -

- Remove openssl-devel and krb5-devel from the BuildRequires.

Tue Oct 17 14:07:15 UTC 2017 -

- Add magic to limit the number of flavors built in the OBS ring
  to non-HPC and mvapich2 builds.
- Fix %libname() for non-HPC builds.
- Fix some summaries and a Requires: of devel-static.

Fri Sep  8 14:35:32 UTC 2017 -

- Convert package to multibuild.
- Add HPC build using environment modules 
  (FATE#321717, FATE#321710).

Tue Aug 29 12:03:27 UTC 2017 -

- fix compiler flag substitution

Mon Jul  3 12:53:05 UTC 2017 -

- Add libsz2-devel to list of Requires for -devel packages, this
  is required for compilation against hdf5 when szlib support is
- Minor specfile cleanups using spec-cleaner.

Fri Jun 16 21:13:30 UTC 2017 -

- Enabled szlib support through libaec's szlib API

Wed Oct  5 19:03:35 UTC 2016 -

- Fix baselibs.conf so numbers.
  Fixes bnc#1002569

Tue Sep  6 08:51:09 UTC 2016 -

-  new hdf5_disable_testphdf5.patch to disable only testphdf5
   for all arches and not all mpi tests for ppc64le
   tempo patch as long as boo#997252 not solved

Mon Sep  5 11:00:59 UTC 2016 -

-  temporarily disable mpi test for ppc64le

Tue Jul 26 15:50:22 UTC 2016 -

- update to 1.10.0-patch1

Mon May 23 21:29:44 UTC 2016 -

- update to 1.8.17, changes documented here:

Fri Apr 15 11:26:40 UTC 2016 -

- add hdf5-mpi.patch same as fedora commit id
  should avoid transient hung of t_pflush1 test

Fri Mar 18 14:26:42 UTC 2016 -

- Split libraries into C, C++, and Fortran versions to comply with
  openSUSE library packaging policies.
  Fixes BNC#971602
- Make Fortran builds required.
- Manually set so numbers.  The autodetected ones weren't matching
  the real ones.

Mon Mar  7 14:35:44 UTC 2016 -

- Remove timestamps from binaries

Thu Jan 28 00:08:01 UTC 2016 -

- update to 1.8.16, changes documented here:
- rebase hdf5-ldouble-ppc64le.patch
- remove hdf5-cpp-compilation-errors.patch
- prepare independent so versions and add TODO

Fri Aug 21 09:45:05 UTC 2015 -

- Currently the regular, openmpi, and mpivachi2 versions of the
  library packages all provide the exact same libraries.  So any
  package built against the -devel package will end up with an
  "unresolvable" build error because there are multiple versions
  of the library it can use. To avoid this, I have added generic
  provides for the library package so packages can depend on the
  version they really need, avoiding these build issues.

Thu Aug 13 07:42:07 UTC 2015 -

- Add hdf5-cpp-compilation-errors.patch: Reverts a change from
  v1.8.15 to H5api_adpt.h that caused compilation errors for C++
  HDF5 applications; patch taken from upstream svn.

Mon Jul 27 11:11:12 UTC 2015 -

- Update subpackage groups
- Make subpackage summaries and descriptions more consistent
- Provide rpm macros for version identification
- Spec file cleanups

Mon Jul 27 10:06:49 UTC 2015 -

- Use explicit library requirements to avoid ambiguities.
  Without this, packages that depend on hdf5 won't know which
  library to use.

Thu Jul 23 11:30:56 UTC 2015 -

- Fix baselibs.conf

Wed Jul 22 11:23:14 UTC 2015 -

- update to 1.8.15
  * New Features
    + Library
      - Added Memory Allocation Functions that Use the Library's Allocator
      - H5Pset_istore_k and H5Pset_sym_k added validation of "ik" to not 
        exceed the max v1 btree entries (2 bytes) to these two routines.
      - Added Functions to Control the Value of H5PL_no_plugin_g without 
        Using an Environment Variable
    + Parallel Library
      - Attached an attribute destroy callback to MPI_COMM_SELF that
        shuts down the HDF5 library when MPI_COMM_SELF is destroyed,
        in other words, on MPI_Finalize. This should fix several issues 
        that users see when they forget to close HDF5 objects before 
    + Fortran API
      - Added Global Variables. These new global variables are equivalent to 
        the C definitions  without the '_F':
        o H5G_UDLINK_F  
        o H5G_SAME_LOC_F
        o H5O_TYPE_UNKNOWN_F
        o H5O_TYPE_GROUP_F
        o H5O_TYPE_DATASET_F
        o H5O_TYPE_NTYPES_F
    + C++ API
      - New Wrappers for C Functions H5P[s/g]et_libver_bounds
      - New Wrappers to Get the Object Header's Version
      - New DataType Constructor
    + Support for New Platforms, Languages, and Compilers
      - Support for Linux 3.10.0-123.20.1.el7 added (LK - 2015/04/01) 
  * Bug Fixes since HDF5-1.8.14
    + Library
      - Addition of Error Tracing Functionality to Several C API Calls
      - H5Rdereference Now Checks for HADDR_UNDEF or Uninitialized References
      - Fixed Bugs in H5Sextent_copy
    + Parallel Library
      - Fixed a Potential Memory Error
      - Parallel Test Problem Fixed
      - MPE Support
    + Tools
      - h5repack crashed on enumerated 8-bit type.
      - h52gif crashed non-8bit images.
      - perform/benchpar.c retired.
      - Source perform/ directory moved to tools/perform.
    + Fortran API
      - Fortran Fails with --enable-fortran2003 and Intel 15.x Compilers
      - h5tenum_insert_f Does Not Work with Default 8 Byte Integers 
        (xlf compiler)
      - Some Fortran APIs Never Returned the Error State
      - Fixed h5pget_class_f 
    + C++ API
      - Combined Two H5File::getObjCount Overloaded Methods
        The following two methods   
        o ssize_t getObjCount(unsigned types) const;
        o ssize_t getObjCount() const;
        were combined into one:
        o ssize_t getObjCount(unsigned types = H5F_OBJ_ALL) const;
      - Many Warnings Were Removed
      - Functionality Deprecation
         The following two constructors of classes AbstractDs, IdComponent,
        H5Location, and H5Object are no longer appropriate after the data member
        "id" had been moved from IdComponent to the sub-classes in previous
        o <Classname>(const hid_t h5_id);
        o <Classname>(const <Classname>& original);
        The copy constructors were no-op and removed in 1.8.15.  The other
        constructors will be removed from 1.10 release, and then from 1.8.17
        if their removal does not cause any problems.
    + High-Level APIs:
      - Suppress Warnings from Flex/Bison-generated Code
      - Changed hdf5_hl.h to Include the HDF5 Main Library "hdf5.h"
      - H5PTcreate_fl Does Not Convert to Memory Datatype
      - Fix for H5LT Attribute Functions
    + Fortran High-Level APIs:
      - Internal Library Fix for Missing Argument Declaration
- Build in thread-safe mode to allow parallel reads
  * These are only unsupported to avoid confusing casual users.  
    The fotran and C++ libraries don't support thread-safe mode, 
    while the C library does.  So you have to explicitly allow
    building the thread-safe C library and the non-thread-safe C++
    and fortran libraries in order to make sure only people who 
    have done their research do so.  Since users are going to be
    accessing this through other programs, this doesn't matter.
- Build fortran 2003 libraries
- Rebase hdf5-non_void_return.patch
- Remove irrelevant hdf5-configure-long-double.patch

Mon May 11 13:37:50 UTC 2015 -

- update hdf5-non_void_return.patch for GCC 5.x

Tue Jan 13 11:07:12 CET 2015 -

- Tag baselibs.conf as source.

Fri Jan  9 12:45:39 UTC 2015 -

- fix typos in ChangeLog

Wed Nov 19 10:52:32 UTC 2014 -

- updated to 1.8.14:
  * bugfix release, see RELEASE.txt

Mon Jun 23 11:57:36 UTC 2014 -

- updated to 1.8.13:
    - Added an H5free_memory API call. This should be used to free memory 
      that has been allocated by HDF5 API calls. H5Tget_member_name and 
      H5Pget_class_name are two examples. The main motivation for this call 
      is Windows, where it is common for application code and the HDF5 Library 
      to be using different C run-time libraries (CRT). Using the new call 
      ensures that the same CRT handles both the allocation and free. This 
      new function can also be useful in any case where the library uses a 
      different memory manager than the application, such as when a debug 
      memory manager is in use or when the HDF5 Library is wrapped for use 
      in a managed language like Python or Java. Fixes HDFFV-7710, 8519, 
      and 8851. (DER - 2014/04/11)
    - The Core VFD (aka Memory VFD) can now be configured to track dirty 
      regions in the file and only write out the changed regions on 
      flush/close. Additionally, a "page aggregation" size can be set that 
      will aggregate small writes into larger writes. For example, setting 
      a 1 MiB page aggregation size will logically partition the the 
      in-memory file into 1 MiB pages that will be written out in their 
      entirety if even a single byte is dirtied. The feature is controlled 
      via the new H5Pset/get_core_write_tracking() API call. A new 
      "core_paged" target has been added to the check-vfd target in 
      test/ that exercises the feature over all HDF5 VFD-aware
      tests. (DER - 2014/04/12)
    - see
      for more
- modified patches:
  * hdf5-LD_LIBRARY_PATH.patch
Sun Jan  5 03:59:20 UTC 2014 -

- Detect IBM long double specialness on ppc64le and don't segfault
  int the testsuite when checking that type.
  Added patches:
  * hdf5-ldouble-ppc64le.patch

Tue Nov 26 14:27:16 UTC 2013 -

- update to 1.8.12:
    - Added a configuration option to change the default plugin path.
      The configure option is --with-default-plugindir=location.
      The cmake option is -DH5_DEFAULT_PLUGINDIR:PATH=location.
      HDFFV-8513.  (ADB 2013/09/04)
    - Renamed FFLAGS to FCFLAGS in configure. (ADB 2013/08/13)
    - CMake can now package a compressed examples file, the default for 
      Windows binaries from HDF Group.  (ADB  - 2013/07/22)
    - h5repack: Added the ability to use plugin filters to read and write 
              files. The option uses the filter number. HDFFV-8345 
              (ADB - 2013/09/04).
    - h5dump: Added the option -N --any_path, which searches the file for 
              paths that match the search path. HDFFV-7989 (ADB - 2013/08/12).
    - h5dump: Added the optional arg 0 to -A, which excludes attributes 
              from display. HDFFV-8134 (ADB - 2013/08/01).
    - Added tutorial examples to C++/examples.  They can be installed by
      "make install-examples" and, in the installed directory, they can be
      executed by running the script file (BMR - 2013/09/28)
    - A new class, H5::H5Location, is added to represent the location concept
      in the C library.  It is a base class to H5::H5File and H5::H5Ojbect,
      whose member functions are moved into H5::H5Location.  H5::H5File can
      now inherent those functions.  As a result, an H5::H5File object can have
      an attribute. (BMR - 2013/09/27)
    - Added wrappers for H5Rget_obj_type2 to retrieve the type of the object
      that an object reference points to. (BMR - 2013/09/27)
	H5O_type_t H5Location::getRefObjType(void *ref, H5R_type_t ref_type)
    - Added wrappers for H5Aexist to check whether an attribute exists given
      a name. (BMR - 2013/09/27)
	bool H5::H5Location::attrExists(const char* name)
	bool H5::H5Location::attrExists(const H5std_string& name)
    - Added a number of overloaded functions for convenience. (BMR - 2013/09/27)
    - bugfixes
    - see
      for more

Tue Sep 24 07:04:42 UTC 2013 -

- hdf5-configure-long-double.patch: fix configure check for unsigned long
  long to long double conversion to not fail spuriously for 128bit long
- Increase testsuite timeout for qemu user space build

Fri Sep 13 12:18:27 UTC 2013 -

- build with -O0 also for gcc 4.8

Fri Jun 14 00:09:30 UTC 2013 -

- increase hdf5_libver to 8

Wed Jun 12 11:22:35 UTC 2013 -

- use host config "linux-gnu" for arm (linux-gnueabi) to get useful
  H5_CFLAGS too
- add hdf5-1.8.11-abort_unknown_host_config.patch, to get noticed
  if hdf5 doesn' t know our host
- minimize hdf5-non_void_return.patch, false positives doesn't make
  problems anymore since now we have always -Wmissing-noreturn
- make verbose
- gcc 4.6.x needs -O0 on some systems

Tue Jun 11 13:45:26 UTC 2013 -

- Update to 1.8.11, changes documented here:
- remove hdf5-fix_printf.patch, fixed by upstream 
- use default CFLAGS (-O2) again if possible

Fri Apr 12 19:25:06 UTC 2013 -

- Update to 1.8.10-patch1:
  * official important bug fixes for 1.8.10
  * see RELEASE.txt "Bug Fixes since HDF5-1.8.10"

Sun Nov 18 12:31:34 UTC 2012 -

- Update to 1.8.10, changes documented here:
- remove hdf5-ph5diff.patch (fixed by upstream)
- add hdf5-fix_printf.patch

Fri Nov 16 16:23:18 UTC 2012 -

- cosmetics, enable parallel build for suse only
- fix build for old findutils

Mon Nov  5 12:31:22 UTC 2012 -

- fixing baselibs.conf

Wed Sep 26 13:17:45 UTC 2012 -

- make sure to install the examples from non-parallel build

Mon Sep 24 12:29:04 UTC 2012 -

- don't use deprecated macro makeinstall
- enable test suite for parallel builds
- always build out of tree instead of copying sources

Fri Sep  7 17:24:21 UTC 2012 -

- parallel versions for openmpi and mvapich2
- add baselibs.conf

Wed Jun 20 09:39:44 UTC 2012 -

 - minor rpm portability build fixes
 - remove unused source file h5comp
 - enable all tests on ppc again (remove hdf5-1.8.8-tstlite.patch)
 - build fixes for arm
   * avoid some false positives "no-return-in-nonvoid-function"
   * disable some tests on arm only (hdf5-1.8.9-tests-arm.patch)
Mon May 28 15:05:43 UTC 2012 -

- Update to 1.8.9
* Changes documented here: 

Mon Mar 12 11:57:39 UTC 2012 -

- install libhdf5.settings (bnc#751747)
- move executables h5cc and h5c++ to the devel package 

Sun Feb 19 04:46:42 UTC 2012 -

- Removed "Fixup headers and scripts for multiarch".

Wed Nov 30 09:02:37 UTC 2011 -

- Remove redundant/unwanted tags/section (cf. specfile guidelines)
- Use %_smp_mflags for parallel building
- Accurate rpmgroup selection for shared library packages

Tue Nov 29 20:05:19 UTC 2011 -

- un-commented --with-pthread and --with-ssl.

Mon Nov 28 14:34:24 UTC 2011 -

- Update to 1.8.8
  * Add patch to avoid setting LD_LIBRARY_PATH
  * Add patch hdf5-non_void_return.patch
  * Fixed non_void_return (thanks to Boris Manojlovic).
  * Drop tstlite patch
  * drop ppc64 longdouble patch, not required anymore
  * Catch up with some Fedora modifications
    - Add rpm macro %%{_hdf5_version} for convenience
  * No Fortran modules for opensuse < 11.4 (Do not pass make check)
  New Features

    - Added the --enable-fortran2003 flag to enable Fortran2003 support
      in the HDF5 Fortran library. The flag should be used along with the
      --enable-fortran flag and takes affect only when the Fortran compiler
      is Fortran2003 compliant. (EIP - 2011/11/14)
    - Added checks for clock_gettime and mach/mach_time.h to both configure and
      CMake.  This will support the move from gettimeofday to clock_gettime's
      monotonic timer in the profiling code in a future release.
      (DER - 2011/10/12)

    - The Windows VFD code has been removed with the exception of the functions
      which set it (H5Pset_fapl_windows, for example).  Setting the Windows
      VFD now really sets the SEC2 VFD.  The WINDOWS_MAX_BUF and
      WINDOWS_USE_STDIO configuration options and #defines have also been
      removed. NOTE: Since the Windows VFD was a clone of the SEC2 VFD, this
      change should be transparent to users.
      (DER - 2011/10/12 - HDFFV-7740, HDFFV-7744)
    - H5Tcreate now supports the string type (fixed-length and variable-
      length). (SLU - 2011/05/20)

    Parallel Library
    - Added new H5Pget_mpio_actual_chunk_opt_mode and
      H5Pget_mpio_actual_io_mode API routines for querying whether/how
      a collective I/O operation completed.  (QAK - 2011/10/12)

    - None

    High-Level APIs
    - Added the following Fortran wrappers for the Dimension Scale APIs:
      (EIP for SB - 2011/10/13 - HDFFV-3797)

    Fortran API
    - The HDF5 Fortran library was enhanced to support the Fortran 2003 standard.
      The following features are available when the HDF5 library is configured
      using the --enable-fortran and --enable-fortran2003 configure flags AND
      if the Fortran compiler is Fortran 2003 compliant:

      - Subroutines overloaded with the C_PTR derived type:
      - Subroutines overloaded with the C_PTR derived type
        and simplified signatures:
      - New subroutines
      - Subroutines with additional optional parameters:
      (EIP - 2011/10/14)

    C++ API
    - None

Thu Jun  2 20:39:35 UTC 2011 -

- uncomment make check

Tue May 24 14:37:23 UTC 2011 -

- updated to 1.8.7

Fri Apr 29 16:11:29 CEST 2011 -

- undrop package.
- Do type-punning using unions to be able to compile without
- Don't use macros in patch names.
- Use _cv_ in variables to be cached by configure.

Thu May  7 19:40:59 CEST 2009 -

- fixed build with new gcc, see [bnc#501751]

Mon Mar  2 17:00:47 CET 2009 -

- save 9MB removing static libraries 

Tue Jan 13 11:41:28 CET 2009 -

- updated to 1.8.2:
        - Upgraded libtool to version 2.2.6a. (MAM - 2008/10/15).
	- Added two new public routines: H5Pget_elink_fapl() and
      	  H5Pset_elink_fapl(). (see bug #1247) (VC - 2008/10/13)
        - Improved free space tracking in file to be faster. (QAK - 2008/10/06)
        - Added 'mounted' field to H5G_info_t struct. (QAK - 2008/07/15)
        - h5repack: added new options -u and -b to add a userblock to an HDF5 
          file during the repack.  (PVN - 2008/08/26)
        - h5repack: added options -t and -a to call H5Pset_alignment while 
          creating a repacked file. (PVN - 2008/08/29)
        - h5ls: added capability to traverse through external links when the -r
          (recursive) flag is given. (NAF - 2008/09/16)
        - h5ls: added -E option to enable traversal of external links.  
          h5ls will not traverse external links without this flag being set.
            (NAF - 2008/10/06)
        - h5dump: when -b flag is used without a keyword after it, binary 
          output defaults to NATIVE. MEMORY keyword was deprecated 
          and replaced by NATIVE keyword. (PVN - 2008/10/30)
        - h5diff: returns 1 when file graphs differ by any object.  
          Error return code was changed to 2 from -1.  (PVN - 2008/10/30)
        - h5import: TEXTFPE (scientific format) was deprecated. Use TEXTFP 
          instead (PVN - 2008/10/30)
         - Added optional parameter 'mounted' to H5Gget_info_f, 
           H5Gget_info_by_idx_f, H5Gget_info_by_name_f (MSB - 2008/09/24)
	 - Added H5Tget_native_type_f (MSB - 2008/09/30)
        - These member functions were added as wrapper for H5Rdereference to
          replace the incorrect IdComponent::dereference().
             void H5Object::dereference(H5Object& obj, void* ref, 
                                        H5R_type_t ref_type=H5R_OBJECT)
             void H5Object::dereference(H5File& h5file, void* ref, 
                                        H5R_type_t ref_type=H5R_OBJECT)
             void H5Object::dereference(Attribute& obj, void* ref, 
                                        H5R_type_t ref_type=H5R_OBJECT)
          In addition, these constructors were added to create the associated
          objects by way of dereference:
             DataSet(H5Object& obj, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             DataSet(H5File& file, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             DataSet(Attribute& attr, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             Group(H5Object& obj, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             Group(H5File& obj, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             Group(Attribute& attr, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             DataType(H5Object& obj, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             DataType(H5File& file, void* ref, H5R_type_t ref_type=H5R_OBJECT)
             DataType(Attribute& attr, void* ref, H5R_type_t ref_type=H5R_OBJECT)
          (BMR - 2008/10/29)
- removed destdir.patch

Mon Jan 12 11:13:33 CET 2009 -

- fortran modules builds from now [bnc#457593]

Tue Nov 11 11:49:54 CET 2008 -

- fixing build of fortran interface moved to the future

Wed Jul  2 10:45:51 CEST 2008 -

- updated to 1.8.1 [bnc#401626]
  * Enhanced group object management
  * Enhanced attribute management and more efficient meta data handling
  * Expanded datatype features
  * Creation order tracking and indexing
  * Improved meta data caching and cache control
  * UTF-8 encoding
  * New I/O filters: n-bit and scale+offset compression
  * New link (H5L) and object (H5O) interfaces and features
  * External and user-defined links
  * New high-level APIs: 
       HDF5 Packet Table (H5PT) and HDF5 Dimension Scale (H5DS)
  * C++ and Fortran interfaces for older high-level APIs:
       H5Lite (H5LT), H5Image (H5IM), and H5Table (H5TB)
  *  New and improved tools
- removed doc package (doc/html no longer provided with package)
- octave builds againist 1.6 compatibility stuff

Wed May  7 13:12:11 CEST 2008 -

- repaired no-return-in-nonvoid-function

Mon Apr 28 11:43:08 CEST 2008 -

- repaired build for
  * ia64 (%ifarch in hdf5.spec)
  * s390, s390x (s390.patch)

Tue Mar 25 11:11:13 CET 2008 -

- package moved from BS, project science
- needed by octave 3.0

openSUSE Build Service is sponsored by