File netcdf.spec of Package netcdf
#
# spec file for package netcdf
#
# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%if 0%{?sles_version}
%define _mvapich2 1
%endif
%if 0%{?suse_version}
%define _openmpi 1
%endif
%define _mpi %{?_openmpi:openmpi} %{?_mvapich2:mvapich2}
Name: netcdf
%define libname libnetcdf
Summary: Command-line programs for the NetCDF scientific data format
License: NetCDF
Group: Productivity/Scientific/Other
Version: 4.4.1.1
Release: 0
%define sonum 11
Url: http://www.unidata.ucar.edu/software/netcdf/
Source: ftp://ftp.unidata.ucar.edu/pub/%{name}/%{name}-%{version}.tar.gz
Source1: nc-config.1.gz
Source99: baselibs.conf
Patch0: %{name}-no_date_time.patch
# PATCH-FIX-UPSTREAM netcdf-disable-szip-linking.patch badshah400@gmail.com -- Disable building with szip support for now, since test nc_test4/tst_interops5.c fails otherwise; this is likely to be fixed with version 4.5.0 of netcdf, but requires big enough changes that we don't backport it here.
Patch1: netcdf-disable-szip-linking.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-build
BuildRequires: gawk
BuildRequires: gcc-c++
BuildRequires: gcc-fortran
BuildRequires: hdf-devel
BuildRequires: hdf5-devel >= 1.8.8
BuildRequires: libcurl-devel >= 7.18.0
BuildRequires: libhdf
BuildRequires: libhdf5
BuildRequires: libhdf5_hl
BuildRequires: libtool
BuildRequires: m4
BuildRequires: pkg-config
BuildRequires: zlib-devel >= 1.2.5
%ifarch %ix86 x86_64 ppc ppc64 s390x armv7l
BuildRequires: valgrind
%endif
%if 0%{?_openmpi}
BuildRequires: hdf-openmpi-devel
BuildRequires: hdf5-openmpi-devel
BuildRequires: libhdf-openmpi
BuildRequires: libhdf5-openmpi
BuildRequires: libhdf5_hl-openmpi
#BuildRequires: libpnetcdf-openmpi
BuildRequires: openmpi-devel
#BuildRequires: parallel-netcdf-openmpi-devel
%endif
%if 0%{?_mvapich2}
BuildRequires: hdf-mvapich2-devel
BuildRequires: hdf5-mvapich2-devel
BuildRequires: libhdf-mvapich2
BuildRequires: libhdf5-mvapich2
BuildRequires: libhdf5_hl-mvapich2
BuildRequires: libpnetcdf-mvapich2
BuildRequires: mvapich2-devel
BuildRequires: parallel-netcdf-mvapich2-devel
%endif
Requires: %{libname}%{sonum} = %{version}
%description
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains utility functions for working with NetCDF files.
%package openmpi
Summary: Command-line programs for the NetCDF scientific data format
Group: Productivity/Scientific/Other
Requires: %{libname}%{sonum}-openmpi = %{version}
%description openmpi
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the openmpi version of utility functions for
working with NetCDF files.
%package mvapich2
Summary: Command-line programs for the NetCDF scientific data format
Group: Productivity/Scientific/Other
Requires: %{libname}%{sonum}-mvapich2 = %{version}
%description mvapich2
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the mvapich2 version of utility functions for
working with NetCDF files.
%package -n %{libname}%{sonum}
Summary: Shared libraries for the NetCDF scientific data format
Group: System/Libraries
Provides: %{libname}-4 = %{version}
Obsoletes: %{libname}-4 < %{version}
# To avoid unresolvable errors due to multiple providers of the library
Provides: %{libname} = %{version}
Obsoletes: %{libname} < %{version}
Requires: libhdf
Requires: libhdf5
Requires: libhdf5_hl
%description -n %{libname}%{sonum}
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
NetCDF (network Common Data Form) is an interface for array-oriented
data access and a collection of software libraries
for C, Fortran, C++, and Perl that provides an implementation of the
interface. The NetCDF library also defines a machine-independent
format for representing scientific data. Together, the interface,
library, and format support the creation, access, and sharing of
scientific data.
NetCDF data is:
- Self-Describing: A NetCDF file includes information about the
data it contains.
- Network-transparent: A NetCDF file is represented in a form that
can be accessed by computers with different ways of storing
integers, characters, and floating-point numbers.
- Direct-access: A small subset of a large dataset may be accessed
efficiently, without first reading through all the preceding
data.
- Appendable: Data can be appended to a NetCDF dataset along one
dimension without copying the dataset or redefining its
structure. The structure of a NetCDF dataset can be changed,
though this sometimes causes the dataset to be copied.
- Sharable: One writer and multiple readers may simultaneously
access the same NetCDF file.
This package contains the NetCDF runtime libraries.
%package -n %{libname}%{sonum}-openmpi
Summary: Shared libraries for the NetCDF scientific data format
# To avoid unresolvable errors due to multiple providers of the library
Group: Productivity/Scientific/Other
Provides: %{libname}-openmpi = %{version}
Obsoletes: %{libname}-openmpi < %{version}
Requires: libhdf-openmpi
Requires: libhdf5-openmpi
Requires: libhdf5_hl-openmpi
#Requires: libpnetcdf-openmpi
%description -n %{libname}%{sonum}-openmpi
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the openmpi versuib if the NetCDF runtime
libraries.
%package -n %{libname}%{sonum}-mvapich2
Summary: Shared libraries for the NetCDF scientific data format
# To avoid unresolvable errors due to multiple providers of the library
Group: Productivity/Scientific/Other
Provides: %{libname}-mvapich2 = %{version}
Obsoletes: %{libname}-mvapich2 < %{version}
Requires: libhdf-mvapich2
Requires: libhdf5-mvapich2
Requires: libhdf5_hl-mvapich2
Requires: libpnetcdf-mvapich2
%description -n %{libname}%{sonum}-mvapich2
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the openmpi versuib if the NetCDF runtime
libraries.
%package devel-data
Summary: Development data files for %{name}
Group: Development/Libraries/C and C++
%description devel-data
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains generic files needed to create projects that use
any version of NetCDF.
%package devel
Summary: Development files for %{name}
Group: Development/Libraries/C and C++
Requires: %{libname}%{sonum} = %{version}
Requires: %{name}-devel-data = %{version}
Requires: hdf-devel
Requires: hdf5-devel >= 1.8.8
Requires: libcurl-devel >= 7.18.0
Requires: pkgconfig
Requires: zlib-devel >= 1.2.5
%description devel
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains all files needed to create projects that use NetCDF.
%package openmpi-devel
Summary: Development files for %{name}-openmpi
Group: Development/Libraries/Parallel
Requires: %{libname}%{sonum}-openmpi = %{version}
Requires: %{name}-devel-data = %{version}
Requires: hdf-openmpi-devel
Requires: hdf5-openmpi-devel >= 1.8.8
Requires: libcurl-devel >= 7.18.0
Requires: openmpi-devel
#Requires: parallel-netcdf-openmpi-devel
Requires: pkgconfig
Requires: zlib-devel >= 1.2.5
%description openmpi-devel
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains all files needed to create projects that use
the openmpi version of NetCDF.
%package mvapich2-devel
Summary: Development files for %{name}-mvapich2
Group: Development/Libraries/Parallel
Requires: %{libname}%{sonum}-mvapich2 = %{version}
Requires: %{name}-devel-data = %{version}
Requires: hdf-mvapich2-devel
Requires: hdf5-mvapich2-devel >= 1.8.8
Requires: libcurl-devel >= 7.18.0
Requires: mvapich2-devel
Requires: parallel-netcdf-mvapich2-devel
Requires: pkgconfig
Requires: zlib-devel >= 1.2.5
%description mvapich2-devel
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains all files needed to create projects that use
the mvapich2 version of NetCDF.
%package devel-static
Summary: Static development files for %{name}
Group: Development/Libraries/C and C++
Requires: %{name}-devel = %{version}
Requires: hdf-devel
Requires: hdf5-devel >= 1.8.8
Requires: libcurl-devel >= 7.18.0
Requires: zlib-devel >= 1.2.5
%description devel-static
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the static libraries for NetCDF.
%package openmpi-devel-static
Summary: Static development files for %{name}-openmpi
Group: Development/Libraries/Parallel
Requires: %{name}-openmpi-devel = %{version}
%description openmpi-devel-static
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the openmpi versions of the static libraries
for NetCDF.
%package mvapich2-devel-static
Summary: Static development files for %{name}-mvapich2
Group: Development/Libraries/Parallel
Requires: %{name}-mvapich2-devel = %{version}
%description mvapich2-devel-static
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the mvapich2 versions of the static libraries
for NetCDF.
%prep
%setup -q
%patch0 -p0 -b .no_date_time
%patch1 -p1
m4 libsrc/ncx.m4 > libsrc/ncx.c
# Fix spurious-executable-perm RPMLINT warning
chmod a-x RELEASE_NOTES.md
%build
autoreconf -fv
echo "prepare parallel builds: %_mpi"
for build_dir in build %_mpi; do
mkdir $build_dir
ln -s ../configure $build_dir
done
pushd build
export CC=gcc CXX=g++ FC=gfortran
export CFLAGS="-fno-strict-aliasing"
export CXXFLAGS="%{optflags}"
export FCFLAGS="%{optflags}"
%configure \
--enable-shared \
--enable-netcdf-4 \
--enable-dap \
--enable-ncgen4 \
--enable-extra-example-tests \
--disable-dap-remote-tests \
--with-pic \
--disable-doxygen \
--enable-static \
--enable-hdf4
make %{?_smp_mflags}
popd
for build_dir in %_mpi; do
pushd $build_dir
popd
done
%install
for build_dir in build; do
# for build_dir in %_mpi build; do
make install DESTDIR="%{buildroot}" -C "$build_dir"
done
mkdir -p %{buildroot}%{_mandir}/man1
install -m644 %{S:1} %{buildroot}%{_mandir}/man1
rm -f %{buildroot}%{_libdir}/*.la
# install netcdf_par.h which is skipped when mpicc in not detected
install -m644 include/netcdf_par.h %{buildroot}%{_includedir}/netcdf_par.h
# rpm macro for version checking
mkdir -p %{buildroot}%{_sysconfdir}/rpm
cat > %{buildroot}%{_sysconfdir}/rpm/macros.netcdf <<EOF
#
# RPM macros for hdf5 packaging
#
%_netcdf_sonum %{sonum}
%_netcdf_version %{version}
EOF
%check
for build_dir in build; do
# for build_dir in %_mpi build; do
make -C $build_dir check
done
%post -n %{libname}%{sonum} -p /sbin/ldconfig
%postun -n %{libname}%{sonum} -p /sbin/ldconfig
%files
%defattr(-,root,root,-)
%doc COPYRIGHT README.md RELEASE_NOTES.md
%{_bindir}/*
%exclude %{_bindir}/nc-config
%{_mandir}/man1/*
%files -n %{libname}%{sonum}
%defattr(-,root,root,-)
%{_libdir}/libnetcdf.so.*
%files devel-data
%defattr(-,root,root,-)
%config %{_sysconfdir}/rpm/macros.netcdf
%files devel
%defattr(-,root,root,-)
%{_bindir}/nc-config
%{_includedir}/*
%{_libdir}/*.so
%{_libdir}/pkgconfig/netcdf.pc
%{_mandir}/man3/*
%{_libdir}/libnetcdf.settings
%files devel-static
%defattr(-,root,root,-)
%{_libdir}/libnetcdf.a
%changelog
