File mafft.changes of Package mafft

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Fri Aug  2 09:19:02 UTC 2024 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Removed extensions due to license.
- Removed empty %check section.
- Main changes from version 7.273:
  - Various bug fixes.
  - Improved --localpair, --globalpair and --genafpair options.
  - Modified a subprogram to estimate the direction of nucleotide
    sequences in the --adjustdirection and --adjustdirectionaccurately
    options, to apply them to a larger number of sequences.
  - Improved handling of degenerated nucleotides.
  - Changed thresholds when working with --auto.
  - Enhanced the --text mode for non-biological data.
  - When the --adjustdirections flag is applied to RNA sequences
    (incl. u), a is flipped to u, instead of t. 
  - Improved iterative addition of sequences.
  - Added a new option, --compactmapout, for handling a large
    number of sequences in the --addfragments option.

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Tue Jul 16 12:07:50 UTC 2024 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Updated to version 7.525.
- Added %check section to spec file.

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Mon Dec  5 14:06:36 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Updated to version 7.505.

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Fri Feb 25 13:55:15 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Used version with extensions.
- Added test data.
- Corrected pointer to ruby interpreter.

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Fri Feb 25 13:12:45 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Added readme.
- MIT license. 

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Fri Feb 25 12:52:44 UTC 2022 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Updated to version 7.490.
- Spec file cleaned according to spec-cleaner.

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Sun Mar 20 09:13:58 UTC 2016 - mailaender@opensuse.org

- update to version 7.273

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Fri Aug 31 21:46:31 UTC 2012 - scorot@free.fr

- first package of version 6.935