File netcdf-fortran.spec of Package netcdf-fortran
#
# spec file for package netcdf
#
# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%global flavor @BUILD_FLAVOR@%{nil}
%define _do_check 1
%global pname netcdf-fortran
%global ver 4.4.4
%global _ver 4_4_4
%if 0%{?is_opensuse} || 0%{?is_backports}
%undefine DisOMPI3
%else
%define DisOMPI3 ExclusiveArch: do_not_build
%endif
%if "%flavor" == ""
ExclusiveArch: do_not_build
%define package_name %pname
%endif
%if "%flavor" == "gnu-openmpi-hpc"
%{?DisOMPI1}
%global compiler_family gnu
%global mpi_flavor openmpi
%global mpi_ver 1
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu-openmpi3-hpc"
%{?DisOMPI3}
%global compiler_family gnu
%global mpi_flavor openmpi
%global mpi_ver 3
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu-openmpi2-hpc"
%{?DisOMPI2}
%global compiler_family gnu
%global mpi_flavor openmpi
%global mpi_ver 2
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu-mvapich2-hpc"
%global compiler_family gnu
%global mpi_flavor mvapich2
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu-mpich-hpc"
%global compiler_family gnu
%global mpi_flavor mpich
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu7-openmpi-hpc"
%{?DisOMPI1}
%global compiler_family gnu
%global mpi_flavor openmpi
%global mpi_ver 1
%global c_f_ver 7
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu7-openmpi3-hpc"
%{?DisOMPI2}
%global compiler_family gnu
%global mpi_flavor openmpi
%global mpi_ver 3
%global c_f_ver 7
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu7-mvapich2-hpc"
%global compiler_family gnu
%global mpi_flavor mvapich2
%global c_f_ver 7
%{bcond_without mpi}
%endif
%if "%flavor" == "gnu7-mpich-hpc"
%global compiler_family gnu
%global mpi_flavor mpich
%global c_f_ver 7
%{bcond_without mpi}
%endif
%define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_')
%{?hpc_init:%{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?with_mpi:-m %mpi_flavor %{?mpi_ver:-V %mpi_ver}}}}
%if 0%{!?package_name:1}
%define package_name %{hpc_package_name %_ver}
%endif
Name: %package_name
%define libname libnetcdf-fortran
Summary: Command-line programs for the NetCDF scientific data format
License: NetCDF
Group: Productivity/Scientific/Other
Version: %ver
Release: 0
%define sonum 6
Url: http://www.unidata.ucar.edu/software/netcdf/
Source: https://github.com/Unidata/netcdf-fortran/archive/v%{version}.tar.gz
Patch0: netcdf4-Return-status-for-non-void-function-always.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-build
BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
BuildRequires: %{compiler_family}-compilers-hpc
BuildRequires: gawk
BuildRequires: libcurl-devel >= 7.18.0
BuildRequires: lua-lmod
BuildRequires: pkg-config
BuildRequires: suse-hpc
BuildRequires: zlib-devel >= 1.2.5
%if %{with mpi}
BuildRequires: %{mpi_flavor}%{?mpi_ver}-%{compiler_family}%{?c_f_ver}-hpc-macros-devel
%endif
BuildRequires: hdf5-%{compiler_family}%{?c_f_ver}%{?with_mpi:-%{mpi_flavor}%{?mpi_ver}}-hpc-devel
BuildRequires: netcdf-%{compiler_family}%{?c_f_ver}%{?with_mpi:-%{mpi_flavor}%{?mpi_ver}}-hpc-devel
Requires: %{libname}%{hpc_package_name_tail %_ver} = %{version}
%description
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
%if 0%{!?mpi_flavor:1}
This package contains utility functions for working with NetCDF files.
%else
This package contains the openmpi version of utility functions for
working with NetCDF files.
%endif
%{hpc_master_package}
%package -n %{libname}%{hpc_package_name_tail %_ver}
Summary: Shared libraries for the NetCDF scientific data format
Group: System/Libraries
%hpc_requires
Requires: libnetcdf-%{compiler_family}%{?c_f_ver}%{?with_mpi:-%{mpi_flavor}%{?mpi_ver}}-hpc
%description -n %{libname}%{hpc_package_name_tail %_ver}
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
NetCDF (network Common Data Form) is an interface for array-oriented
data access and a collection of software libraries
for C, Fortran, C++, and Perl that provides an implementation of the
interface. The NetCDF library also defines a machine-independent
format for representing scientific data. Together, the interface,
library, and format support the creation, access, and sharing of
scientific data.
NetCDF data is:
- Self-Describing: A NetCDF file includes information about the
data it contains.
- Network-transparent: A NetCDF file is represented in a form that
can be accessed by computers with different ways of storing
integers, characters, and floating-point numbers.
- Direct-access: A small subset of a large dataset may be accessed
efficiently, without first reading through all the preceding
data.
- Appendable: Data can be appended to a NetCDF dataset along one
dimension without copying the dataset or redefining its
structure. The structure of a NetCDF dataset can be changed,
though this sometimes causes the dataset to be copied.
- Sharable: One writer and multiple readers may simultaneously
access the same NetCDF file.
This package contains all files needed to create projects that use
%{?mpi_flavor:the %mpi_flavor version of} NetCDF.
%{hpc_master_package -l -L -n %{libname}%{hpc_package_name_tail}}
%package devel
Summary: Development files for %{name}
Group: Development/Libraries/Parallel
Requires: %{libname}%{hpc_package_name_tail %_ver} = %{version}
Requires: libcurl-devel >= 7.18.0
Requires: pkgconfig
Requires: zlib-devel >= 1.2.5
%hpc_requires_devel
Requires: netcdf-%{compiler_family}%{?c_f_ver}%{?with_mpi:-%{mpi_flavor}%{?mpi_ver}}-hpc-devel
%description devel
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains all files needed to create projects that use
%{?mpi_flavor:the %mpi_flavor version of} NetCDF.
%{hpc_master_package devel}
%package devel-static
Summary: Static development files for %{name}
Group: Development/Libraries/Parallel
Requires: %{name}-devel = %{version}
#Requires: hdf-devel
Requires: hdf5-devel >= 1.8.8
Requires: libcurl-devel >= 7.18.0
Requires: zlib-devel >= 1.2.5
%description devel-static
NetCDF is a set of software libraries and self-describing,
machine-independent data formats that support the creation, access,
and sharing of array-oriented scientific data.
This package contains the static libraries for
%{?mpi_flavor:the %mpi_flavor version of} NetCDF.
%prep
%setup -q -n %{pname}-%{version}
%patch0 -p1
# Fix spurious-executable-perm RPMLINT warning
chmod a-x RELEASE_NOTES.md
%build
%{hpc_setup}
module load pnetcdf
export CFLAGS="-I $NETCDF_INC -L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
export CPPFLAGS=$CFLAGS
export LDFLAGS="-L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
%if 0%{?mpi_flavor:1}
export CC="mpicc"
export FC="mpif90"
export F77="mpif77"
%endif
%hpc_configure \
--enable-shared \
--enable-netcdf-4 \
--enable-dap \
--enable-ncgen4 \
--with-pic \
--disable-doxygen \
--enable-static
make %{?_smp_mflags}
%install
%{hpc_setup}
module load pnetcdf
export CFLAGS="-I $NETCDF_INC -L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
export CPPFLAGS=$CFLAGS
export LDFLAGS="-L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
%if 0%{?mpi_flavor:1}
export CC="mpicc"
export FC="mpif90"
export F77="mpif77"
%endif
make install DESTDIR="%{buildroot}"
rm -f %{buildroot}%{hpc_libdir}/*.la
mv %{buildroot}%{hpc_bindir}/nf-config %{buildroot}%{hpc_bindir}/nf-fortran-config
%hpc_write_modules_files
#%%Module1.0#####################################################################
proc ModulesHelp { } {
puts stderr " "
puts stderr "This module loads the NetCDF Fortran API built with the %{compiler_family} compiler toolchain."
puts stderr " "
puts stderr "Note that this build of NetCDF leverages the HDF I/O library and requires linkage"
puts stderr "against hdf5 and the native C NetCDF library. Consequently, phdf5 and the standard C"
puts stderr "version of NetCDF are loaded automatically via this module. A typical compilation"
puts stderr "example for Fortran applications requiring NetCDF is as follows:"
puts stderr " "
puts stderr "\\\$FC -I\\\$NETCDF_FORTRAN_INC app.f90 -L\\\$NETCDF_FORTRAN_LIB -lnetcdff -L\\\$NETCDF_LIB -lnetcdf -L\\\$HDF5_LIB -lhdf5"
puts stderr "\nVersion %{version}\n"
}
module-whatis "Name: %{hpc_upcase %pname} built with %{compiler_family} toolchain %{mpi_flavor: and %{mpi_flavor}}"
module-whatis "Version: %{version}"
module-whatis "Category: runtime library"
module-whatis "Description: %{SUMMARY:0}"
module-whatis "%{url}"
# Require generic netcdf
if [ expr [ module-info mode load ] || [module-info mode display ] ] {
if { ![is-loaded netcdf] } {
module load pnetcdf
}
}
set version %{version}
prepend-path PATH %{hpc_bindir}
prepend-path MANPATH %{hpc_mandir}
prepend-path LD_LIBRARY_PATH %{hpc_libdir}
setenv %{hpc_upcase_trans_hyph %pname}_DIR %{hpc_prefix}
if {[file isdirectory %{hpc_bindir}]} {
setenv %{hpc_upcase_trans_hyph %pname}_BIN %{hpc_bindir}
}
if {[file isdirectory %{hpc_includedir}]} {
prepend-path LIBRARY_PATH %{hpc_libdir}
prepend-path CPATH %{hpc_includedir}
prepend-path C_INCLUDE_PATH %{hpc_includedir}
prepend-path CPLUS_INCLUDE_PATH %{hpc_includedir}
prepend-path INCLUDE %{hpc_includedir}
%hpc_modulefile_add_pkgconfig_path
setenv %{hpc_upcase_trans_hyph %pname}_LIB %{hpc_libdir}
setenv %{hpc_upcase_trans_hyph %pname}_INC %{hpc_includedir}
}
EOF
%if %_do_check
%check
%{hpc_setup}
module load pnetcdf
export CFLAGS="-I $NETCDF_INC -L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
export CPPFLAGS=$CFLAGS
export LDFLAGS="-L$NETCDF_LIB -lnetcdf -L$HDF5_LIB -lhdf5"
%if 0%{?mpi_flavor:1}
export CC="mpicc"
export FC="mpif90"
export F77="mpif77"
%endif
make check
%endif
%post -n %{libname}%{hpc_package_name_tail %_ver} -p /sbin/ldconfig
%postun -n %{libname}%{hpc_package_name_tail %_ver}
/sbin/ldconfig
%hpc_module_delete_if_default
%files
%defattr(-,root,root,-)
%doc COPYRIGHT README.md RELEASE_NOTES.md
%{hpc_bindir}/
%files -n %{libname}%{hpc_package_name_tail %_ver}
%defattr(-,root,root,-)
%{hpc_dirs}
%{hpc_modules_files}
%{hpc_libdir}/libnetcdff.so.*
%files devel
%defattr(-,root,root,-)
%{hpc_includedir}/
%dir %{hpc_pkgconfigdir}
%{hpc_libdir}/pkgconfig/netcdf-fortran.pc
%{hpc_libdir}/*.so
%dir %{hpc_datadir}
%dir %{hpc_mandir}
%{hpc_mandir}/man3/
%files devel-static
%defattr(-,root,root,-)
%{hpc_libdir}/libnetcdff.a
%changelog
