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netcdf
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File netcdf.spec of Package netcdf
# # spec file for package netcdf # # Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via http://bugs.opensuse.org/ # %if 0%{?sles_version} %define _mvapich2 1 %endif %if 0%{?suse_version} %define _openmpi 1 %endif %define _mpi %{?_openmpi:openmpi} %{?_mvapich2:mvapich2} Name: netcdf %define libname libnetcdf Summary: Command-line programs for the NetCDF scientific data format License: NetCDF Group: Productivity/Scientific/Other Version: 4.3.3.1 Release: 0 %define sonum 7 Url: http://www.unidata.ucar.edu/software/netcdf/ Source: ftp://ftp.unidata.ucar.edu/pub/%{name}/%{name}-%{version}.tar.gz Source1: nc-config.1.gz Source2: baselibs.conf Patch0: %{name}-correct_casting.patch Patch1: %{name}-codecleanup.patch Patch2: %{name}-no_date_time.patch #Strip FFLAGS from nc-config #Use pkgconfig in nc-config to avoid multi-lib issues Patch3: netcdf-pkgconfig.patch #Strip FFLAGS from nc-config BuildRoot: %{_tmppath}/%{name}-%{version}-build BuildRequires: gawk BuildRequires: gcc-c++ BuildRequires: gcc-fortran BuildRequires: hdf-devel BuildRequires: hdf5-devel >= 1.8.8 BuildRequires: libcurl-devel >= 7.18.0 BuildRequires: libhdf BuildRequires: libhdf5 BuildRequires: libhdf5_hl BuildRequires: pkg-config BuildRequires: zlib-devel >= 1.2.5 %ifarch %ix86 x86_64 ppc ppc64 s390x armv7l BuildRequires: valgrind %endif %if 0%{?_openmpi} BuildRequires: hdf-openmpi-devel BuildRequires: hdf5-openmpi-devel BuildRequires: libhdf-openmpi BuildRequires: libhdf5-openmpi BuildRequires: libhdf5_hl-openmpi BuildRequires: libpnetcdf-openmpi BuildRequires: openmpi-devel BuildRequires: parallel-netcdf-openmpi-devel %endif %if 0%{?_mvapich2} BuildRequires: hdf-mvapich2-devel BuildRequires: hdf5-mvapich2-devel BuildRequires: libhdf-mvapich2 BuildRequires: libhdf5-mvapich2 BuildRequires: libhdf5_hl-mvapich2 BuildRequires: libpnetcdf-mvapich2 BuildRequires: mvapich2-devel BuildRequires: parallel-netcdf-mvapich2-devel %endif Requires: %{libname}%{sonum} = %{version} %description NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains utility functions for working with NetCDF files. %package openmpi Summary: Command-line programs for the NetCDF scientific data format Group: Productivity/Scientific/Other Requires: %{libname}%{sonum}-openmpi = %{version} %description openmpi NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the openmpi version of utility functions for working with NetCDF files. %package mvapich2 Summary: Command-line programs for the NetCDF scientific data format Group: Productivity/Scientific/Other Requires: %{libname}%{sonum}-mvapich2 = %{version} %description mvapich2 NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the mvapich2 version of utility functions for working with NetCDF files. %package -n %{libname}%{sonum} Summary: Shared libraries for the NetCDF scientific data format Group: Productivity/Scientific/Other Provides: %{libname}-4 = %{version} Obsoletes: %{libname}-4 < %{version} # To avoid unresolvable errors due to multiple providers of the library Provides: %{libname} = %{version} Obsoletes: %{libname} < %{version} Requires: libhdf Requires: libhdf5 Requires: libhdf5_hl %description -n %{libname}%{sonum} NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the NetCDF runtime libraries. %package -n %{libname}%{sonum}-openmpi Summary: Shared libraries for the NetCDF scientific data format Group: Productivity/Scientific/Other # To avoid unresolvable errors due to multiple providers of the library Provides: %{libname}-openmpi = %{version} Obsoletes: %{libname}-openmpi < %{version} Requires: libhdf-openmpi Requires: libhdf5-openmpi Requires: libhdf5_hl-openmpi Requires: libpnetcdf-openmpi %description -n %{libname}%{sonum}-openmpi NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the openmpi versuib if the NetCDF runtime libraries. %package -n %{libname}%{sonum}-mvapich2 Summary: Shared libraries for the NetCDF scientific data format Group: Productivity/Scientific/Other # To avoid unresolvable errors due to multiple providers of the library Provides: %{libname}-mvapich2 = %{version} Obsoletes: %{libname}-mvapich2 < %{version} Requires: libhdf-mvapich2 Requires: libhdf5-mvapich2 Requires: libhdf5_hl-mvapich2 Requires: libpnetcdf-mvapich2 %description -n %{libname}%{sonum}-mvapich2 NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the openmpi versuib if the NetCDF runtime libraries. %package devel-data Summary: Development data files for %{name} Group: Development/Libraries/C and C++ %description devel-data NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains generic files needed to create projects that use any version of NetCDF. %package devel Summary: Development files for %{name} Group: Development/Libraries/C and C++ Requires: %{libname}%{sonum} = %{version} Requires: %{name}-devel-data = %{version} Requires: hdf-devel Requires: hdf5-devel >= 1.8.8 Requires: libcurl-devel >= 7.18.0 Requires: pkgconfig Requires: zlib-devel >= 1.2.5 %description devel NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains all files needed to create projects that use NetCDF. %package openmpi-devel Summary: Development files for %{name}-openmpi Group: Development/Libraries/Parallel Requires: %{libname}%{sonum}-openmpi = %{version} Requires: %{name}-devel-data = %{version} Requires: hdf-openmpi-devel Requires: hdf5-openmpi-devel >= 1.8.8 Requires: libcurl-devel >= 7.18.0 Requires: openmpi-devel Requires: parallel-netcdf-openmpi-devel Requires: pkgconfig Requires: zlib-devel >= 1.2.5 %description openmpi-devel NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains all files needed to create projects that use the openmpi version of NetCDF. %package mvapich2-devel Summary: Development files for %{name}-mvapich2 Group: Development/Libraries/Parallel Requires: %{libname}%{sonum}-mvapich2 = %{version} Requires: %{name}-devel-data = %{version} Requires: hdf-mvapich2-devel Requires: hdf5-mvapich2-devel >= 1.8.8 Requires: libcurl-devel >= 7.18.0 Requires: mvapich2-devel Requires: parallel-netcdf-mvapich2-devel Requires: pkgconfig Requires: zlib-devel >= 1.2.5 %description mvapich2-devel NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains all files needed to create projects that use the mvapich2 version of NetCDF. %package devel-static Summary: Static development files for %{name} Group: Development/Libraries/C and C++ Requires: %{name}-devel = %{version} Requires: hdf-devel Requires: hdf5-devel >= 1.8.8 Requires: libcurl-devel >= 7.18.0 Requires: zlib-devel >= 1.2.5 %description devel-static NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the static libraries for NetCDF. %package openmpi-devel-static Summary: Static development files for %{name}-openmpi Group: Development/Libraries/Parallel Requires: %{name}-openmpi-devel = %{version} %description openmpi-devel-static NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the openmpi versions of the static libraries for NetCDF. %package mvapich2-devel-static Summary: Static development files for %{name}-mvapich2 Group: Development/Libraries/Parallel Requires: %{name}-mvapich2-devel = %{version} %description mvapich2-devel-static NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. NetCDF (network Common Data Form) is an interface for array-oriented data access and a freely-distributed collection of software libraries for C, Fortran, C++, and perl that provides an implementation of the interface. The NetCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data. The NetCDF software was developed at the Unidata Program Center in Boulder, Colorado. NetCDF data is: - Self-Describing: A NetCDF file includes information about the data it contains. - Network-transparent: A NetCDF file is represented in a form that can be accessed by computers with different ways of storing integers, characters, and floating-point numbers. - Direct-access: A small subset of a large dataset may be accessed efficiently, without first reading through all the preceding data. - Appendable: Data can be appended to a NetCDF dataset along one dimension without copying the dataset or redefining its structure. The structure of a NetCDF dataset can be changed, though this sometimes causes the dataset to be copied. - Sharable: One writer and multiple readers may simultaneously access the same NetCDF file. This package contains the mvapich2 versions of the static libraries for NetCDF. %prep %setup -q %patch0 -p1 -b .correct_casting %patch1 -p1 -b .codecleanup %patch2 -p0 -b .no_date_time %patch3 -p1 -b .pkgconfig echo "prepare parallel builds: %_mpi" for build_dir in build %_mpi; do mkdir $build_dir ln -s ../configure $build_dir done %build pushd build export CC=gcc CXX=g++ FC=gfortran export CFLAGS="%{optflags} -fno-strict-aliasing" export CXXFLAGS="%{optflags}" export FCFLAGS="%{optflags}" %configure \ --enable-shared \ --enable-netcdf-4 \ --enable-dap \ --enable-ncgen4 \ --enable-extra-example-tests \ --disable-dap-remote-tests \ --with-pic \ --disable-doxygen \ --enable-static \ --enable-hdf4 make %{?_smp_mflags} popd for build_dir in %_mpi; do pushd $build_dir popd done %install for build_dir in build; do # for build_dir in %_mpi build; do make install DESTDIR="%{buildroot}" -C "$build_dir" done mkdir -p %{buildroot}%{_mandir}/man1 install -m644 %{S:1} %{buildroot}%{_mandir}/man1 rm -f %{buildroot}%{_libdir}/*.la # rpm macro for version checking mkdir -p %{buildroot}%{_sysconfdir}/rpm cat > %{buildroot}%{_sysconfdir}/rpm/macros.netcdf <<EOF # # RPM macros for hdf5 packaging # %_netcdf_sonum %{sonum} %_netcdf_version %{version} EOF %check for build_dir in build; do # for build_dir in %_mpi build; do make -C $build_dir check done %post -n %{libname}%{sonum} -p /sbin/ldconfig %postun -n %{libname}%{sonum} -p /sbin/ldconfig %files %defattr(-,root,root,-) %doc COPYRIGHT README.md RELEASE_NOTES.md %{_bindir}/* %exclude %{_bindir}/nc-config %{_mandir}/man1/* %files -n %{libname}%{sonum} %defattr(-,root,root,-) %{_libdir}/libnetcdf.so.* %{_libdir}/libnetcdf.settings %files devel-data %defattr(-,root,root,-) %{_sysconfdir}/rpm/macros.netcdf %files devel %defattr(-,root,root,-) %{_bindir}/nc-config %{_includedir}/* %{_libdir}/*.so %{_libdir}/pkgconfig/netcdf.pc %{_mandir}/man3/* %files devel-static %defattr(-,root,root,-) %{_libdir}/libnetcdf.a %changelog
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