File R-MALDIquant.spec of Package R-MALDIquant
%global packname MALDIquant
%global rlibdir %{_libdir}/R/library
Name: R-%{packname}
Version: 1.17
Release: 0
Summary: Quantitative Analysis of Mass Spectrometry Data
Group: Development/Libraries/Other
License: GPL-3.0+
URL: http://strimmerlab.org/software/maldiquant/
Source: http://cran.r-project.org/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-build
Requires: R-base
Requires: R-methods
BuildRequires: texlive
BuildRequires: texinfo
BuildRequires: fdupes
%if 0%{?suse_version} <= 1220 && 0%{?suse_version} != 1110
BuildRequires: texlive-fonts-extra
%endif
BuildRequires: R-base-devel R-methods
BuildRequires: gcc-c++
%description
A complete analysis pipeline for matrix-assisted laser
desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional
mass spectrometry data. In addition to commonly used plotting and
processing methods it includes distinctive features, namely baseline
subtraction methods such as morphological filters (TopHat) or the
statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP),
peak alignment using warping functions, handling of replicated
measurements as well as allowing spectra with different resolutions.
%prep
%setup -q -c -n %{packname}
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
%files
%defattr(-, root, root, -)
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/html
%doc %{rlibdir}/%{packname}/DESCRIPTION
%doc %{rlibdir}/%{packname}/NEWS
%doc %{rlibdir}/%{packname}/CITATION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/help
%{rlibdir}/%{packname}/data/
%{rlibdir}/%{packname}/demo/
%{rlibdir}/%{packname}/libs/
%changelog
