File R-pan.spec of Package R-pan

#
# spec file for package R-pan
#
# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.

# Please submit bugfixes or comments via https://bugs.opensuse.org/
#


%global packname  pan
%global rlibdir   %{_libdir}/R/library
Name:           R-%{packname}
Version:        1.6
Release:        0
Summary:        Multiple Imputation for Multivariate Panel or Clustered Data
License:        GPL-3.0-only
Group:          Development/Libraries/Other
URL:            http://cran.r-project.org/web/packages/%{packname}
Source:         http://cran.r-project.org/src/contrib/%{packname}_%{version}.tar.gz
BuildRequires:  R-base-devel
BuildRequires:  R-lme4
BuildRequires:  R-mitools
BuildRequires:  fdupes
BuildRequires:  gcc-fortran
BuildRequires:  texinfo
Recommends:     R-lme4
Recommends:     R-mitools
%if 0%{?sle_version} > 120400 || 0%{?is_opensuse}
BuildRequires:  tex(ae.sty)
BuildRequires:  tex(inconsolata.sty)
BuildRequires:  tex(fancyvrb.sty)
BuildRequires:  tex(natbib.sty)
BuildRequires:  tex(pdfpages.sty)
%else
BuildRequires:  texlive
%endif

%description
It provides functions and examples for maximum likelihood estimation for
generalized linear mixed models and Gibbs sampler for multivariate linear
mixed models with incomplete data, as described in Schafer JL (1997)
"Imputation of missing covariates under a multivariate linear mixed
model". Technical report 97-04, Dept. of Statistics, The Pennsylvania
State University.

%prep
%setup -q -c -n %{packname}
find %{packname}/src \( -name '*.a' -or -name '*.o' -or -name '*.so' -or -name '*.lo' -or -name '*.la' \) -print -delete
chmod a-x %{packname}/INDEX %{packname}/inst/CITATION %{packname}/inst/doc/pan-tr.Rnw

%build

%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
find %{packname}/src \( -name '*.a' -or -name '*.o' -or -name '*.so' -or -name '*.lo' -or -name '*.la' \) -delete
rm -f %{buildroot}%{rlibdir}/R.css
%fdupes %{buildroot}%{rlibdir}/%{packname}

%check
export LANG=en_US.UTF-8
export _R_CHECK_FORCE_SUGGESTS_=false
%{_bindir}/R CMD check %{packname} --no-examples

%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/html
%doc %{rlibdir}/%{packname}/DESCRIPTION
%doc %{rlibdir}/%{packname}/CITATION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/NAMESPACE
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/libs
%{rlibdir}/%{packname}/data
%{rlibdir}/%{packname}/help

%changelog