File coot.spec of Package coot

#
# spec file for package coot
#
# Copyright (c) 2009 Ansgar Esztermann
# Copyright (c) 2022 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.

# Please submit bugfixes or comments via https://bugs.opensuse.org/
#

Name:           coot
License:        GPL-3.0
Group:          Productivity/Scientific/Chemistry
Summary:        Crystallographic Object-Oriented Toolkit
Version:        1.0.05
Release:        0
URL:            https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
Source0:        https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/source/releases/coot-%{version}.tar.gz
BuildRequires:  autoconf
BuildRequires:  automake
BuildRequires:  libtool
BuildRequires:  blas-devel
BuildRequires:  fdupes
BuildRequires:  gcc-c++
BuildRequires:  glm-devel
BuildRequires:  goocanvas2-devel
BuildRequires:  gsl-devel
BuildRequires:  gtk3-devel
BuildRequires:  clipper-devel
BuildRequires:  libboost_headers-devel
BuildRequires:  libboost_python3-devel
BuildRequires:  libmmdb-devel
BuildRequires:  libccp4-devel
BuildRequires:  ssm-devel
BuildRequires:  python3-devel >= 3.7
BuildRequires:  python3-gobject-devel
BuildRequires:  swig
BuildRequires:  curl-devel >= 7.9.7

%description
Coot is for macromolecular model building, model completion and
validation, particularly suitable for protein modelling using X-ray
data.

Coot displays maps and models and allows model manipulations such as
idealization, real space refinement, manual rotation/translation,
rigid-body fitting, ligand search, solvation, mutations, rotamers,
Ramachandran plots, skeletonization...

%package  devel
Summary:  Crystallographic Object-Oriented Toolkit
Group:    Development/Libraries/C and C++
Requires: %{name} = %{version}

%description devel
Coot is for macromolecular model building, model completion and
validation, particularly suitable for protein modelling using X-ray
data.

Coot displays maps and models and allows model manipulations such as
idealization, real space refinement, manual rotation/translation,
rigid-body fitting, ligand search, solvation, mutations, rotamers,
Ramachandran plots, skeletonization...

This package contains headers and libraries needed for development.

%package  libs
Summary:  Crystallographic Object-Oriented Toolkit
Group:    Productivity/Scientific/Chemistry
Requires: %{name} = %{version}

%description libs
Coot is for macromolecular model building, model completion and
validation, particularly suitable for protein modelling using X-ray
data.

Coot displays maps and models and allows model manipulations such as
idealization, real space refinement, manual rotation/translation,
rigid-body fitting, ligand search, solvation, mutations, rotamers,
Ramachandran plots, skeletonization...

This package contains shared libraries.

%prep
%setup -q
%autopatch -p1

%build
sed -i -e 's/AM_SINGLE_FFTW2//' \
       -e '/git/ d' -e '/revision_count/ d' configure.ac
autoreconf -fiv
%configure \
  --disable-static \
  --with-gtk3 \
  --includedir=%{_includedir}/%{name} --libdir=%{_libdir}/%{name}
# Makefile is racy ...
for lib in utils mini-mol geometry lidia-core protein_db coot-utils analysis angles \
  build ccp4mg-utils compat cootaneer cootilus db-main ideal ligand coords \
  density-contour goograph high-res lbg pli skeleton ; do
    %make_build -C ${lib}
done
%make_build -C src coot-bin
%make_build

%install
%make_install
rm %{buildroot}%{_libdir}/%{name}/*.la
rm %{buildroot}%{python3_sitearch}/*.la
%fdupes %{buildroot}/%{_datadir}

%files
%{_bindir}/coot
%{_bindir}/coot-available-comp-id
%{_bindir}/coot-bfactan
%{_bindir}/coot-identify-protein
%{_bindir}/coot-ligand-validation
%{_bindir}/coot-mini-rsr
%{_bindir}/coot-density-score-by-residue
%{_bindir}/dynarama
%{_bindir}/findligand
%{_bindir}/findwaters
%{_bindir}/lidia
%{_bindir}/mmrrcc
%{_libexecdir}/*-bin
%{_libexecdir}/coot-make-ligands-db
%dir %{_datadir}/%{name}
%{_datadir}/%{name}/*
%{_datadir}/appdata/coot.appdata.xml
%{_datadir}/applications/coot.desktop
%{_datadir}/icons/hicolor/*/apps/coot.*
%{_datadir}/man/man1/*.1*
%{python3_sitearch}/_coot*.so*
%{python3_sitelib}/*

%files devel
%dir %{_includedir}/coot
%{_includedir}/coot/*
%{_libdir}/coot/*.so

%files libs
%dir %{_libdir}/coot
%{_libdir}/coot/*.so.*

%changelog