File libmesh.spec of Package libmesh
#
# spec file for package libmesh
#
# Copyright (c) 2024 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
%global flavor @BUILD_FLAVOR@%{nil}
%if !0%{?is_opensuse} && 0%{?sle_version:1} && 0%{?sle_version} < 150200
%define DisOMPI3 ExclusiveArch: do_not_build
%endif
%if !0%{?is_opensuse} && 0%{?sle_version:1} && 0%{?sle_version} < 150600
%define DisOMPI4 ExclusiveArch: do_not_build
%endif
%define sover_mesh 0
%define sover_timpi 5
%define sover_metaphysicl 8
%define mesh_version 1.7.6
%define timpi_version 1.2.1
%define metaphysicl_version 1.1.0
%define method opt
%bcond_with petsc
%bcond_without check
%if "%{flavor}" == ""
ExclusiveArch: do_not_build
%endif
%if "%{flavor}" == "serial"
%bcond_with hpc
%endif
# this is a non-HPC build
%if "%{flavor}" == "openmpi4"
%{?DisOMPI4}
%global mpi_flavor openmpi
%define mpi_ver 4
%bcond_with hpc
%endif
%if "%{flavor}" == "openmpi5"
%{?DisOMPI5}
%global mpi_flavor openmpi
%define mpi_ver 5
%bcond_with hpc
%endif
%{?mpi_flavor:%{bcond_without mpi}}%{!?mpi_flavor:%{bcond_with mpi}}
%define mpi_ext %{?mpi_ver}
%if %{with mpi}
%global my_suffix -%{mpi_flavor}%{?mpi_ext}
%define my_prefix %{_libdir}/mpi/gcc/%{mpi_flavor}%{?mpi_ext}
%define my_bindir %{my_prefix}/bin
%define my_datadir %{my_prefix}/share
%define my_incdir %{my_prefix}/include
%define my_libdir %{my_prefix}/%{_lib}
%define my_sysconfdir %{my_prefix}/etc
%else
%define my_prefix %{_prefix}
%define my_bindir %{_bindir}
%define my_datadir %{_datadir}
%define my_libdir %{_libdir}
%define my_incdir %{_includedir}
%define my_sysconfdir %{_sysconfdir}
%endif
%define libname(n:m:s:) lib%{-n*}%{-m:_%{-m*}}%{-s*}%{?my_suffix}
Name: libmesh%{?my_suffix}
Version: %{mesh_version}
Release: 0
Summary: A framework for the numerical simulation of partial differential equations
License: LGPL-2.1-only
Group: Development/Libraries/C and C++
URL: https://libmesh.github.io/
Source0: https://github.com/libMesh/libmesh/releases/download/v%{mesh_version}/libmesh-%{mesh_version}.tar.xz
Patch0: use_system_netcdf.patch
BuildRequires: automake
BuildRequires: blas-devel
BuildRequires: libboost_headers-devel >= 1.57
BuildRequires: eigen3-devel
BuildRequires: gcc-c++
BuildRequires: gcc-fortran
BuildRequires: glpk-devel
BuildRequires: hdf5%{?my_suffix}-devel
BuildRequires: hwloc-devel
BuildRequires: lapack-devel
BuildRequires: libtool
BuildRequires: nlopt-devel
%if %{with mpi}
BuildRequires: %{mpi_flavor}%{?mpi_ext}-devel
BuildRequires: pastix%{my_suffix}-devel
# libmesh insists on a MPI enabled VTK version, even when configured without MPI
BuildRequires: vtk%{my_suffix}-devel
%endif
%if %{with petsc}
BuildRequires: petsc%{?my_suffix}-devel
%endif
BuildRequires: pkgconfig
BuildRequires: tbb-devel
BuildRequires: libtirpc-devel
BuildRequires: xz
BuildRequires: zlib-devel
BuildRequires: pkgconfig(netcdf)
%description
The libMesh library provides a framework for the numerical simulation of partial
differential equations using arbitrary unstructured discretizations on serial
and parallel platforms. A major goal of the library is to provide support for
adaptive mesh refinement (AMR) computations in parallel while allowing a
research scientist to focus on the physics they are modeling.
%package -n %{libname -n mesh -m %{method} -s %{sover_mesh}}
Summary: A framework for the numerical simulation of partial differential equations
Group: System/Libraries
%description -n %{libname -n mesh -m %{method} -s %{sover_mesh}}
The libMesh library provides a framework for the numerical simulation of partial
differential equations.
%package -n %{libname -n timpi -m %{method} -s %{sover_timpi}}
Summary: Templated Interface to MPI
Group: System/Libraries
Version: %{timpi_version}
%description -n %{libname -n timpi -m %{method} -s %{sover_timpi}}
The libMesh library provides a framework for the numerical simulation of partial
differential equations.
This package contains the TIMPI shared library.
# TODO: libmesh allows external libmetaphysicl, split
%package -n %{libname -n metaphysicl -s %{sover_metaphysicl}}
Summary: Metaprogramming for numerical simulations
Group: System/Libraries
Version: %{metaphysicl_version}
%description -n %{libname -n metaphysicl -s %{sover_metaphysicl}}
The libMesh library provides a framework for the numerical simulation of partial
differential equations.
This package contains the metaphysicl shared library.
%package devel
Summary: Development files for %{name}
Group: Development/Libraries/C and C++
Requires: %{libname -n mesh -m %{method} -s %{sover_mesh}} = %{mesh_version}
Requires: %{libname -n timpi -m %{method} -s %{sover_timpi}} = %{timpi_version}
Requires: %{libname -n metaphysicl -s %{sover_metaphysicl}} = %{metaphysicl_version}
%description devel
The %{name}-devel package contains libraries and header files for
developing applications that use %{name}.
%prep
%setup -q -n libmesh-%{mesh_version}
for d in boost eigen laspack triangle tetgen metis netcdf; do
rm -R contrib/$d
sed -i -e "s:AC_CONFIG_FILES.*contrib/$d.*::" m4/libmesh_optional_packages.m4
sed -i -e "s:SUBDIRS.*\s$d.*::" contrib/Makefile.am
done
%patch -P 0 -p1
sed -i -e "s:AC_CONFIG_FILES.*contrib/netcdf.*::" m4/netcdf.m4
%build
autoreconf --install
# Find all configure scripts and use something reproducible for the hostname/date
# ac_hostname comes from system autoconf/general.m4
find . -iname \*configure -ls -exec sed -i \
-e '/uname -n/ s/hostname || uname -n/echo OBS/ ' \
-e "/date +/ s/date +/date -d@$SOURCE_DATE_EPOCH +/ " \
'{}' \;
%if %{with petsc}
export PETSC_DIR="$(echo %{my_libdir}/petsc/3.*/linux-gnu-c-opt)"
%endif
# clean up shipped *_config.h files - https://github.com/libMesh/libmesh/issues/3153
find . -iname \*_config.h -not -iname \*exodus_config.h -ls -delete
mkdir build; pushd build
%global _configure ../configure
%configure \
USER=abuild \
--enable-strict-lgpl \
--disable-examples \
%{?with_petsc:--enable-petsc-required} \
%{?with_mpi:--enable-mpi} \
--prefix=%{my_prefix} \
--bindir=%{my_bindir} \
--libdir=%{my_libdir} \
--sysconfdir=%{my_sysconfdir} \
--disable-metis \
--enable-netcdf=system \
--disable-qhull \
--disable-parmetis \
--enable-hdf5 \
--with-hdf5=%{my_prefix} \
--with-methods="%{method}" \
--with-thread-model=auto
%make_build
# Build tests without running them
%make_build check TESTS=
%install
pushd build
make DESTDIR=%{buildroot} install
# cleanup
rm %{buildroot}/%{my_libdir}/pkgconfig/Make.common
rm %{buildroot}/%{my_prefix}/Make.common
rm -Rf %{buildroot}/%{my_prefix}/contrib
rm -Rf %{buildroot}/%{_datadir}/reference_elements
rm %{buildroot}/%{_includedir}/gzstream.h
rm %{buildroot}/%{my_libdir}/*{.la,.a}
rm -Rf %{buildroot}/%{my_sysconfdir}/libmesh
%if "%{_bindir}" != "%{my_bindir}"
mv %{buildroot}%{_bindir}/* %{buildroot}%{my_bindir}
%endif
find %{buildroot}/%{my_bindir} -type f -not \( -iname \*-config -o -iname \*_version\* \) -ls -delete
# fix up *-config scripts and pkgconfig
find %{buildroot}/%{my_bindir} -type f -iname \*-config -ls -exec \
sed -i -e 's@-Wl,-rpath,[^ ]* @@g' \
-e '/^builddir=/ d' \
'{}' \; \
-exec grep rpath '{}' \;
find %{buildroot}/%{my_libdir}/pkgconfig -type f -iname \*.pc -ls -exec \
sed -i -e 's@-Wl,-rpath,[^ ]* @@g' \
'{}' \; \
-exec grep rpath '{}' \;
%check
%if %{with check}
pushd build
make %{?_smp_mflags} check
%endif
%post -n %{libname -n mesh -m %{method} -s %{sover_mesh}} -p /sbin/ldconfig
%postun -n %{libname -n mesh -m %{method} -s %{sover_mesh}} -p /sbin/ldconfig
%post -n %{libname -n timpi -m %{method} -s %{sover_timpi}} -p /sbin/ldconfig
%postun -n %{libname -n timpi -m %{method} -s %{sover_timpi}} -p /sbin/ldconfig
%post -n %{libname -n metaphysicl -s %{sover_metaphysicl}} -p /sbin/ldconfig
%postun -n %{libname -n metaphysicl -s %{sover_metaphysicl}} -p /sbin/ldconfig
%files -n %{libname -n mesh -m %{method} -s %{sover_mesh}}
%{my_libdir}/libmesh*.so.*
%files -n %{libname -n timpi -m %{method} -s %{sover_timpi}}
%{my_libdir}/libtimpi*.so.*
%files -n %{libname -n metaphysicl -s %{sover_metaphysicl}}
%{my_libdir}/libmetaphysicl*.so.*
%files devel
%{my_bindir}/*-config
%{my_bindir}/*_version{,-opt}
%{my_incdir}/libmesh
%{my_incdir}/timpi
%{my_incdir}/metaphysicl
%dir %{my_datadir}/aclocal
%{my_datadir}/aclocal/*
%{my_libdir}/*.so
%{my_libdir}/pkgconfig/*.pc
%changelog
