File probcons-cstring.patch of Package probcons
diff -Nur probcons/CompareToRef.cc probcons-mod/CompareToRef.cc
--- probcons/CompareToRef.cc 2004-07-13 22:04:34.000000000 +0100
+++ probcons-mod/CompareToRef.cc 2009-12-18 04:55:56.000000000 +0000
@@ -18,6 +18,7 @@
#include <cstdlib>
#include <cerrno>
#include <iomanip>
+#include <cstring>
const char CORE_BLOCK = 'h';
typedef pair<int,int> PII;
diff -Nur probcons/Main.cc probcons-mod/Main.cc
--- probcons/Main.cc 2007-04-03 18:37:16.000000000 +0100
+++ probcons-mod/Main.cc 2009-12-18 04:55:15.000000000 +0000
@@ -23,6 +23,7 @@
#include <cstdlib>
#include <cerrno>
#include <iomanip>
+#include <cstring>
string parametersInputFilename = "";
string parametersOutputFilename = "no training";
diff -Nur probcons/ProjectPairwise.cc probcons-mod/ProjectPairwise.cc
--- probcons/ProjectPairwise.cc 2004-07-13 22:04:34.000000000 +0100
+++ probcons-mod/ProjectPairwise.cc 2009-12-18 04:56:21.000000000 +0000
@@ -18,6 +18,7 @@
#include <cstdlib>
#include <cerrno>
#include <iomanip>
+#include <cstring>
bool compressGaps = true;